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新型磺胺苯甲酰胺衍生物作为 HBV 衣壳组装调节剂的设计、合成与生物评价。

Design, synthesis, and biological evaluation of novel sulfamoylbenzamide derivatives as HBV capsid assembly modulators.

机构信息

Department of Medicinal Chemistry, Key Laboratory of Chemical Biology, Ministry of Education, School of Pharmaceutical Sciences, Shandong University, 44, West Culture Road, 250012 Jinan, Shandong, PR China.

Department of Molecular Microbiology and Immunology, Saint Louis University School of Medicine, 1100, S. Grand Blvd, St. Louis, MO 63104, USA.

出版信息

Bioorg Chem. 2022 Dec;129:106192. doi: 10.1016/j.bioorg.2022.106192. Epub 2022 Oct 13.

DOI:10.1016/j.bioorg.2022.106192
PMID:36265355
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10591450/
Abstract

Capsid assembly modulators (CAMs) represent a novel class of antiviral agents targeting hepatitis B virus (HBV) capsid to disrupt the assembly process. NVR 3-778 is the first CAM to demonstrate antiviral activity in patients infected with HBV. However, the relatively low aqueous solubility and moderate activity in the human body halted further development of NVR 3-778. To improve the anti-HBV activity and the drug-like properties of NVR 3-778, we designed and synthesized a series of NVR 3-778 derivatives. Notably, phenylboronic acid-bearing compound 7b (EC = 0.83 ± 0.33 µM, CC = 19.4 ± 5.0 µM) displayed comparable anti-HBV activity to NVR 3-778 (EC = 0.73 ± 0.20 µM, CC = 23.4 ± 7.0 µM). Besides, 7b showed improved water solubility (328.8 µg/mL, pH 7) compared to NVR 3-778 (35.8 µg/mL, pH 7). Size exclusion chromatography (SEC) and quantification of encapsidated viral RNA were used to demonstrate that 7b behaves as a class II CAM similar to NVR 3-778. Moreover, molecular dynamics (MD) simulations were conducted to rationalize the structure-activity relationships (SARs) of these novel derivatives and to understand their key interactions with the binding pocket, which provide useful indications for guiding the further rational design of more effective anti-HBV drugs.

摘要

衣壳组装调节剂 (CAMs) 代表了一类针对乙型肝炎病毒 (HBV) 衣壳的新型抗病毒药物,旨在破坏衣壳组装过程。NVR 3-778 是首个在感染 HBV 的患者中表现出抗病毒活性的 CAM。然而,其相对较低的水溶解度和适中的体内活性导致 NVR 3-778 的进一步开发被终止。为了提高 NVR 3-778 的抗 HBV 活性和类药性,我们设计并合成了一系列 NVR 3-778 衍生物。值得注意的是,含苯硼酸的化合物 7b(EC=0.83±0.33µM,CC=19.4±5.0µM)表现出与 NVR 3-778 相当的抗 HBV 活性(EC=0.73±0.20µM,CC=23.4±7.0µM)。此外,与 NVR 3-778 相比(pH7 时为 35.8µg/mL),7b 的水溶性得到了显著改善(pH7 时为 328.8µg/mL)。尺寸排阻色谱(SEC)和包裹病毒 RNA 的定量分析表明,7b 作为一种类似 NVR 3-778 的 II 类 CAM 发挥作用。此外,还进行了分子动力学(MD)模拟,以合理解释这些新型衍生物的构效关系(SARs),并理解它们与结合口袋的关键相互作用,为进一步指导设计更有效的抗 HBV 药物提供了有用的线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/1c45ded76c6d/nihms-1936737-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/f60ae55493e9/nihms-1936737-f0001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/e9f649ac6642/nihms-1936737-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/bb9d9de6fcb7/nihms-1936737-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/6bfc00dd2b86/nihms-1936737-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/d1ea1b4e5453/nihms-1936737-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/1c45ded76c6d/nihms-1936737-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/f60ae55493e9/nihms-1936737-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/ec265f54459b/nihms-1936737-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/a3979e26c8a7/nihms-1936737-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/e9f649ac6642/nihms-1936737-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/bb9d9de6fcb7/nihms-1936737-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/6bfc00dd2b86/nihms-1936737-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/d1ea1b4e5453/nihms-1936737-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3172/10591450/1c45ded76c6d/nihms-1936737-f0008.jpg

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