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DOCK 家族鸟苷酸交换因子的结构生物学

Structural biology of DOCK-family guanine nucleotide exchange factors.

机构信息

Department of Molecular and Cellular Biology, University of Geneva, Switzerland.

Montreal Clinical Research Institute (IRCM), Canada.

出版信息

FEBS Lett. 2023 Mar;597(6):794-810. doi: 10.1002/1873-3468.14523. Epub 2022 Nov 4.

Abstract

DOCK proteins are a family of multi-domain guanine nucleotide exchange factors (GEFs) that activate the RHO GTPases CDC42 and RAC1, thereby regulating several RHO GTPase-dependent cellular processes. DOCK proteins are characterized by the catalytic DHR2 domain (DOCK ), and a phosphatidylinositol(3,4,5)P -binding DHR1 domain (DOCK ) that targets DOCK proteins to plasma membranes. DOCK-family GEFs are divided into four subfamilies (A to D) differing in their specificities for CDC42 and RAC1, and the composition of accessory signalling domains. Additionally, the DOCK-A and DOCK-B subfamilies are constitutively associated with ELMO proteins that auto-inhibit DOCK GEF activity. We review structural studies that have provided mechanistic insights into DOCK-protein functions. These studies revealed how a conserved nucleotide sensor in DOCK catalyses nucleotide exchange, the basis for how different DOCK proteins activate specifically CDC42 and RAC1, and sometimes both, and how up-stream regulators relieve the ELMO-mediated auto-inhibition. We conclude by presenting a model for full-length DOCK9 of the DOCK-D subfamily. The involvement of DOCK GEFs in a range of diseases highlights the importance of gaining structural insights into these proteins to better understand and specifically target them.

摘要

DOCK 蛋白是一类具有多个结构域的鸟嘌呤核苷酸交换因子(GEFs),能够激活 CDC42 和 RAC1,从而调节多种依赖 RHO GTPase 的细胞过程。DOCK 蛋白的特征是具有催化结构域 DHR2(DOCK )和一个磷酸肌醇(3,4,5)P 结合结构域 DHR1(DOCK ),该结构域将 DOCK 蛋白靶向质膜。DOCK 家族 GEFs 分为四个亚家族(A 至 D),它们在特异性激活 CDC42 和 RAC1 以及辅助信号结构域组成方面存在差异。此外,DOCK-A 和 DOCK-B 亚家族与 ELMO 蛋白组成复合物,ELMO 蛋白自动抑制 DOCK GEF 的活性。我们综述了结构研究为 DOCK 蛋白功能提供的机制见解。这些研究揭示了 DOCK 中保守的核苷酸传感器如何催化核苷酸交换,不同 DOCK 蛋白如何特异性激活 CDC42 和 RAC1,有时同时激活两者,以及上游调节剂如何解除 ELMO 介导的自动抑制。最后,我们提出了 DOCK-D 亚家族全长 DOCK9 的模型。DOCK GEFs 参与多种疾病,突出了获得这些蛋白结构见解的重要性,以便更好地理解和特异性靶向它们。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5fa7/10152721/73e436bce015/FEB2-597-794-g010.jpg

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