Graduate School of Science, Osaka Metropolitan University, Osaka, Japan.
Graduate School of Science, Osaka City University, Osaka, Japan.
Open Biol. 2022 Oct;12(10):220083. doi: 10.1098/rsob.220083. Epub 2022 Oct 26.
MreB is a bacterial protein belonging to the actin superfamily. This protein polymerizes into an antiparallel double-stranded filament that determines cell shape by maintaining cell wall synthesis. , a helical wall-less bacterium, has five MreB homologous (SpeMreB1-5) that probably contribute to swimming motility. Here, we investigated the structure, ATPase activity and polymerization dynamics of SpeMreB3 and SpeMreB5. SpeMreB3 polymerized into a double-stranded filament with possible antiparallel polarity, while SpeMreB5 formed sheets which contained the antiparallel filament, upon nucleotide binding. SpeMreB3 showed slow P release owing to the lack of an amino acid motif conserved in the catalytic centre of MreB family proteins. Our SpeMreB3 crystal structures and analyses of SpeMreB3 and SpeMreB5 variants showed that the amino acid motif probably plays a role in eliminating a nucleophilic water proton during ATP hydrolysis. Sedimentation assays suggest that SpeMreB3 has a lower polymerization activity than SpeMreB5, though their polymerization dynamics are qualitatively similar to those of other actin superfamily proteins, in which pre-ATP hydrolysis and post-P release states are unfavourable for them to remain as filaments.
MreB 是一种细菌蛋白,属于肌动蛋白超家族。这种蛋白聚合成一个反平行的双链丝状结构,通过维持细胞壁合成来决定细胞形状。 是一种螺旋形无壁细菌,有五个 MreB 同源物(SpeMreB1-5),可能有助于游泳运动。在这里,我们研究了 SpeMreB3 和 SpeMreB5 的结构、ATPase 活性和聚合动力学。SpeMreB3 聚合成具有可能的反平行极性的双链丝状结构,而 SpeMreB5 在结合核苷酸时形成包含反平行丝状结构的片状结构。SpeMreB3 由于缺乏 MreB 家族蛋白催化中心保守的氨基酸模体,导致 P 释放缓慢。我们的 SpeMreB3 晶体结构以及对 SpeMreB3 和 SpeMreB5 变体的分析表明,该氨基酸模体可能在 ATP 水解过程中消除亲核水分子质子方面发挥作用。沉降分析表明,SpeMreB3 的聚合活性低于 SpeMreB5,尽管它们的聚合动力学与其他肌动蛋白超家族蛋白的聚合动力学相似,其中预 ATP 水解和后 P 释放状态不利于它们保持丝状结构。