Wang Yiwei, Li Zhongyan, Bai Lili, Zhang Dongyong, Zhang Tianchi, Ren Fu
Department of Anatomy, College of Basic Medical Sciences, Shenyang Medical College, Shenyang 110034, China.
Department of Pathology, College of Basic Medical Sciences, Shenyang Medical College, Shenyang 110034, China.
Brain Sci. 2022 Oct 20;12(10):1415. doi: 10.3390/brainsci12101415.
The effect of scinderin (SCIN) on cancer progression has been studied, but its role in glioma remains unknown. This study describes the value of SCIN for the diagnosis, prognosis, and treatment of glioma.
The expression of SCIN was analyzed using the GEPIA, Oncomine, cBioPortal, and CGGA databases. GO/KEGG enrichment analysis of similar genes to SCIN were performed using the R software package, and the protein-protein interaction (PPI) network was analyzed by the STRING and GeneMANIA databases. The correlations of mRNA expression between SCIN and MMP2/9 were analyzed by TCGA glioma. Simultaneously, the TISIDB and TIMER databases were used to analyze the correlation between SCIN and immune infiltration. Finally, SCIN and MMP2/9 protein expression among different grades of glioma was performed and the results were obtained via immunohistochemistry and Western blot assays. We used the Kaplan-Meier method and Cox proportional hazards model to assess the impact of SCIN and MMP2/9 on glioma patients' survival. The correlations between SCIN and MMP2/9 were analyzed by immunohistochemistry and Western blot assays.
SCIN was upregulated in glioma patients with a poor prognosis. The GO and KEGG enrichment analysis showed the functional relationship between SCIN and the immune cell activation and regulation. In addition, the expression of SCIN was related to MMP2/9 in glioma. The correlation analysis showed that SCIN expression was associated with tumor purity and immune infiltration. SCIN and MMP2/9 are negative prognostic factors resulting in worsening glioma patients' survival.
Our studies demonstrated that SCIN expression was associated with MMP2/9, immune infiltration, and a poor prognosis in glioma. SCIN may serve as a potential prognostic marker and an immune therapy target for glioma.
已对scinderin(SCIN)对癌症进展的影响进行了研究,但其在胶质瘤中的作用仍不清楚。本研究描述了SCIN在胶质瘤诊断、预后和治疗中的价值。
使用GEPIA、Oncomine、cBioPortal和CGGA数据库分析SCIN的表达。使用R软件包对与SCIN相似的基因进行GO/KEGG富集分析,并通过STRING和GeneMANIA数据库分析蛋白质-蛋白质相互作用(PPI)网络。通过TCGA胶质瘤分析SCIN与MMP2/9之间mRNA表达的相关性。同时,使用TISIDB和TIMER数据库分析SCIN与免疫浸润之间的相关性。最后,对不同级别胶质瘤中的SCIN和MMP2/9蛋白表达进行检测,并通过免疫组织化学和蛋白质印迹分析获得结果。我们使用Kaplan-Meier方法和Cox比例风险模型评估SCIN和MMP2/9对胶质瘤患者生存的影响。通过免疫组织化学和蛋白质印迹分析检测SCIN与MMP2/9之间的相关性。
SCIN在预后不良的胶质瘤患者中上调。GO和KEGG富集分析显示了SCIN与免疫细胞激活和调节之间的功能关系。此外,SCIN的表达与胶质瘤中的MMP2/9相关。相关性分析表明,SCIN表达与肿瘤纯度和免疫浸润相关。SCIN和MMP2/9是导致胶质瘤患者生存恶化的负性预后因素。
我们的研究表明,SCIN表达与胶质瘤中的MMP2/9、免疫浸润和不良预后相关。SCIN可能作为胶质瘤的潜在预后标志物和免疫治疗靶点。