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真实三维域中钙动力学的模拟。

Simulation of Calcium Dynamics in Realistic Three-Dimensional Domains.

机构信息

Department of Mathematics, University of Auckland, Auckland 1142, New Zealand.

Department of Engineering Science, University of Auckland, Auckland 1142, New Zealand.

出版信息

Biomolecules. 2022 Oct 11;12(10):1455. doi: 10.3390/biom12101455.

DOI:10.3390/biom12101455
PMID:36291663
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9599163/
Abstract

The cytosolic concentration of free calcium ions ([Ca2+]) is an important intracellular messenger in most cell types, and the spatial distribution of [Ca2+] is often critical. In a salivary gland acinar cell, a polarised epithelial cell, whose principal function is to transport water and thus secrete saliva, [Ca2+] controls the secretion of primary saliva, but increases in [Ca2+] are localised to the apical regions of the cell. Hence, any quantitative explanation of how [Ca2+] controls saliva secretion must take into careful account the spatial distribution of the various Ca2+ sources, Ca2+ sinks, and Ca2+-sensitive ion channels. Based on optical slices, we have previously constructed anatomically accurate three-dimensional models of seven salivary gland acinar cells, and thus shown that a model in which Ca2+ responses are confined to the apical regions of the cell is sufficient to provide a quantitative and predictive explanation of primary saliva secretion. However, reconstruction of such anatomically accurate cells is extremely time consuming and inefficient. Here, we present an alternative, mostly automated method of constructing three-dimensional cells that are approximately anatomically accurate and show that the new construction preserves the quantitative accuracy of the model.

摘要

细胞浆内游离钙离子浓度([Ca2+])是大多数细胞类型中重要的细胞内信使,而[Ca2+]的空间分布往往是关键的。在唾液腺腺泡细胞中,一种极化的上皮细胞,其主要功能是运输水并因此分泌唾液,[Ca2+]控制着初级唾液的分泌,但[Ca2+]的增加局限于细胞的顶端区域。因此,任何定量解释[Ca2+]如何控制唾液分泌的方法都必须仔细考虑各种 Ca2+来源、Ca2+汇和 Ca2+-敏感离子通道的空间分布。基于光学切片,我们之前已经构建了七个唾液腺腺泡细胞的解剖学精确三维模型,因此表明,将 Ca2+反应局限于细胞的顶端区域的模型足以提供对初级唾液分泌的定量和预测解释。然而,重建这种解剖学精确的细胞非常耗时且效率低下。在这里,我们提出了一种替代方法,主要是自动化构建三维细胞,这些细胞在解剖学上大致准确,并表明新的构建方法保持了模型的定量准确性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/9a937ebe9350/biomolecules-12-01455-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/fdb85175b3c1/biomolecules-12-01455-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/2ded3f4464bb/biomolecules-12-01455-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/8ce16af0e5b8/biomolecules-12-01455-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/1c34377d1d73/biomolecules-12-01455-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/dd17d4ee3fc9/biomolecules-12-01455-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/5bddd2c1acf2/biomolecules-12-01455-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/872ca781e35f/biomolecules-12-01455-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/28b9020f6cab/biomolecules-12-01455-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/923f055c1199/biomolecules-12-01455-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/9a937ebe9350/biomolecules-12-01455-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/fdb85175b3c1/biomolecules-12-01455-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/2ded3f4464bb/biomolecules-12-01455-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/8ce16af0e5b8/biomolecules-12-01455-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/1c34377d1d73/biomolecules-12-01455-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/dd17d4ee3fc9/biomolecules-12-01455-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/5bddd2c1acf2/biomolecules-12-01455-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/872ca781e35f/biomolecules-12-01455-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/28b9020f6cab/biomolecules-12-01455-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/923f055c1199/biomolecules-12-01455-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cddd/9599163/9a937ebe9350/biomolecules-12-01455-g010.jpg

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本文引用的文献

1
A Mathematical Model of Salivary Gland Duct Cells.唾液腺导管细胞的数学模型。
Bull Math Biol. 2022 Jul 7;84(8):84. doi: 10.1007/s11538-022-01041-3.
2
Highly localized intracellular Ca signals promote optimal salivary gland fluid secretion.高度局部化的细胞内 Ca 信号促进最佳唾液腺分泌。
Elife. 2021 Jul 9;10:e66170. doi: 10.7554/eLife.66170.
3
Calcium Dynamics and Water Transport in Salivary Acinar Cells.唾液腺细胞中的钙动力学和水转运。
Bull Math Biol. 2021 Feb 17;83(4):31. doi: 10.1007/s11538-020-00841-9.
4
A Multicellular Model of Primary Saliva Secretion in the Parotid Gland.一种多细胞模型在腮腺中实现原发性唾液分泌。
Bull Math Biol. 2020 Mar 11;82(3):38. doi: 10.1007/s11538-020-00712-3.
5
A Model of [Formula: see text] Dynamics in an Accurate Reconstruction of Parotid Acinar Cells.在准确重建腮腺腺泡细胞的过程中[公式:见正文]动力学模型。
Bull Math Biol. 2019 May;81(5):1394-1426. doi: 10.1007/s11538-018-00563-z. Epub 2019 Jan 14.
6
A Mathematical Model of Fluid Transport in an Accurate Reconstruction of Parotid Acinar Cells.一个准确重建的腮腺腺泡细胞中流体传输的数学模型。
Bull Math Biol. 2019 Mar;81(3):699-721. doi: 10.1007/s11538-018-0534-z. Epub 2018 Nov 27.
7
New saliva secretion model based on the expression of Na-K pump and K channels in the apical membrane of parotid acinar cells.基于腮腺腺泡细胞顶膜上的 Na-K 泵和 K 通道表达的新唾液分泌模型。
Pflugers Arch. 2018 Apr;470(4):613-621. doi: 10.1007/s00424-018-2109-0. Epub 2018 Jan 17.
8
On the dynamical structure of calcium oscillations.论钙振荡的动力学结构
Proc Natl Acad Sci U S A. 2017 Feb 14;114(7):1456-1461. doi: 10.1073/pnas.1614613114. Epub 2017 Feb 1.
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The physiology of salivary secretion.唾液分泌的生理学。
Periodontol 2000. 2016 Feb;70(1):11-25. doi: 10.1111/prd.12116.
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Frequency decoding of calcium oscillations.钙振荡的频率解码
Biochim Biophys Acta. 2014 Mar;1840(3):964-9. doi: 10.1016/j.bbagen.2013.11.015. Epub 2013 Nov 22.