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来自高效产β-内酰胺酶细菌EMB20基因组序列的见解。

Insights from the genome sequence of EMB20, an efficient β-lactamase-producing bacterium.

作者信息

Fatima Huma, Kumar Sumit, Khare Sunil Kumar

机构信息

Enzyme and Microbial Biochemistry Laboratory, Department of Chemistry, Indian Institute of Technology Delhi, Hauz Khas, New Delhi, 110016 India.

Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh India.

出版信息

3 Biotech. 2022 Dec;12(12):330. doi: 10.1007/s13205-022-03395-w. Epub 2022 Oct 24.

Abstract

UNLABELLED

We report here the whole-genome sequence of β-lactamase-producing bacteria EMB20. The genome sequence of EMB20 has a size of 5.8 Mb (G + C content of 35.52%) with 5593 coding DNA sequences (CDSs), 108 tRNA, and 14 rRNA operons. The bacterium has the unique ability to produce a β-lactamase enzyme with high activity. β-Lactamases are one of the most common causes of antimicrobial resistance as these enzymes inactivate almost all β-lactam antibiotics. The antibiotic susceptibility test showed that the . EMB20 is producing β-lactamase and can degrade the β-lactam antibiotics. Further, the antibiotic degradation potential of this bacteria was confirmed by growing the bacteria in the presence of varying concentrations of β-lactam antibiotic, amoxicillin. The bacteria were able to hydrolyze amoxicillin up to 50 mg/L in 4 h. Furthermore, the analyses of the genome revealed the presence of multiple β-lactamase genes, possibly involved in antibiotic degradation. The availability of the genome sequence will provide further insights into the mechanism of antimicrobial resistance by β-lactamase-producing bacteria.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s13205-022-03395-w.

摘要

未标记

我们在此报告产β-内酰胺酶细菌EMB20的全基因组序列。EMB20的基因组序列大小为5.8 Mb(G + C含量为35.52%),有5593个编码DNA序列(CDS)、108个tRNA和14个rRNA操纵子。该细菌具有产生高活性β-内酰胺酶的独特能力。β-内酰胺酶是抗菌药物耐药性最常见的原因之一,因为这些酶能使几乎所有β-内酰胺类抗生素失活。抗生素敏感性试验表明,EMB20产生β-内酰胺酶并能降解β-内酰胺类抗生素。此外,通过在不同浓度的β-内酰胺类抗生素阿莫西林存在下培养该细菌,证实了其抗生素降解潜力。该细菌能够在4小时内将高达50 mg/L的阿莫西林水解。此外,基因组分析揭示了多个β-内酰胺酶基因的存在,可能参与抗生素降解。基因组序列的可得性将为产β-内酰胺酶细菌的抗菌药物耐药机制提供进一步的见解。

补充信息

在线版本包含可在10.1007/s13205-022-03395-w获取的补充材料。

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