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25 年的基因组在线数据库(GOLD):v.9 中的数据更新和新功能。

Twenty-five years of Genomes OnLine Database (GOLD): data updates and new features in v.9.

机构信息

DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA.

出版信息

Nucleic Acids Res. 2023 Jan 6;51(D1):D957-D963. doi: 10.1093/nar/gkac974.

Abstract

The Genomes OnLine Database (GOLD) (https://gold.jgi.doe.gov/) at the Department of Energy Joint Genome Institute (DOE-JGI) continues to maintain its role as one of the flagship genomic metadata repositories of the world. The ever-increasing number of projects and metadata are freely available to the user community world-wide. GOLD's metadata is consumed by scientists and remains an important source for large-scale comparative genomics analysis initiatives. Encouraged by this active user engagement and growth, GOLD has continued to add new components and capabilities. The new features such as a public Application Programming Interface (API) and Ecosystem landing page as well as the growth of different entities in this current GOLD v.9 edition are described in detail in this manuscript.

摘要

基因组在线数据库(GOLD)(https://gold.jgi.doe.gov/)由能源部联合基因组研究所(DOE-JGI)维护,继续作为世界上最重要的基因组元数据存储库之一发挥作用。越来越多的项目和元数据可供全球用户社区免费使用。GOLD 的元数据被科学家们使用,并仍然是大规模比较基因组学分析计划的重要来源。受到这种活跃的用户参与和增长的鼓舞,GOLD 继续添加新的组件和功能。本文详细描述了新版本 GOLD v.9 中新增的公共应用程序编程接口(API)和生态系统登录页面等新功能,以及不同实体的增长情况。

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