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《基因组在线数据库》(GOLD)v.4:基因组和宏基因组项目及其相关元数据的现状。

The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata.

机构信息

Department of Energy Joint Genome Institute, Microbial Genomics and Metagenomics Program, 2800 Mitchell Drive, Walnut Creek, CA, USA.

出版信息

Nucleic Acids Res. 2012 Jan;40(Database issue):D571-9. doi: 10.1093/nar/gkr1100. Epub 2011 Dec 1.

Abstract

The Genomes OnLine Database (GOLD, http://www.genomesonline.org/) is a comprehensive resource for centralized monitoring of genome and metagenome projects worldwide. Both complete and ongoing projects, along with their associated metadata, can be accessed in GOLD through precomputed tables and a search page. As of September 2011, GOLD, now on version 4.0, contains information for 11,472 sequencing projects, of which 2907 have been completed and their sequence data has been deposited in a public repository. Out of these complete projects, 1918 are finished and 989 are permanent drafts. Moreover, GOLD contains information for 340 metagenome studies associated with 1927 metagenome samples. GOLD continues to expand, moving toward the goal of providing the most comprehensive repository of metadata information related to the projects and their organisms/environments in accordance with the Minimum Information about any (x) Sequence specification and beyond.

摘要

基因组在线数据库(GOLD,http://www.genomesonline.org/)是一个全球性的综合性资源,用于集中监测基因组和宏基因组项目。通过预计算的表格和搜索页面,可以在 GOLD 中访问完整的和正在进行的项目以及它们的相关元数据。截至 2011 年 9 月,GOLD 现在已经升级到 4.0 版本,包含了 11472 个测序项目的信息,其中 2907 个项目已经完成,其序列数据已存入公共存储库。在这些完整的项目中,有 1918 个是已完成的,989 个是永久草案。此外,GOLD 还包含了 340 项与 1927 个宏基因组样本相关的宏基因组研究的信息。GOLD 仍在不断扩展,朝着提供与项目及其生物体/环境相关的元数据信息的最全面存储库的目标迈进,这些信息符合任何(x)序列规范的最低信息要求,并超越了这一要求。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa74/3245063/a7dbd308487e/gkr1100f1a.jpg

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