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加拿大关爱罕见病组织:网络科学在罕见病基因发现方面十年的成果。

Care4Rare Canada: Outcomes from a decade of network science for rare disease gene discovery.

机构信息

Children's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, ON K1H 8L1, Canada.

Children's Hospital of Eastern Ontario Research Institute, University of Ottawa, Ottawa, ON K1H 8L1, Canada.

出版信息

Am J Hum Genet. 2022 Nov 3;109(11):1947-1959. doi: 10.1016/j.ajhg.2022.10.002.

DOI:10.1016/j.ajhg.2022.10.002
PMID:36332610
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9674964/
Abstract

The past decade has witnessed a rapid evolution in rare disease (RD) research, fueled by the availability of genome-wide (exome and genome) sequencing. In 2011, as this transformative technology was introduced to the research community, the Care4Rare Canada Consortium was launched: initially as FORGE, followed by Care4Rare, and Care4Rare SOLVE. Over what amounted to three eras of diagnosis and discovery, the Care4Rare Consortium used exome sequencing and, more recently, genome and other 'omic technologies to identify the molecular cause of unsolved RDs. We achieved a diagnostic yield of 34% (623/1,806 of participating families), including the discovery of deleterious variants in 121 genes not previously associated with disease, and we continue to study candidate variants in novel genes for 145 families. The Consortium has made significant contributions to RD research, including development of platforms for data collection and sharing and instigating a Canadian network to catalyze functional characterization research of novel genes. The Consortium was instrumental to implementing genome-wide sequencing as a publicly funded test for RD diagnosis in Canada. Despite the successes of the past decade, the challenge of solving all RDs remains enormous, and the work is far from over. We must leverage clinical and 'omic data for secondary use, develop tools and policies to support safe data sharing, continue to explore the utility of new and emerging technologies, and optimize research protocols to delineate complex disease mechanisms. Successful approaches in each of these realms is required to offer diagnostic clarity to all families with RDs.

摘要

过去十年见证了罕见病(RD)研究的快速发展,这得益于全基因组(外显子组和基因组)测序技术的可用性。2011 年,这项变革性技术被引入研究界,加拿大 Care4Rare 联盟成立:最初是 FORGE,随后是 Care4Rare,以及 Care4Rare SOLVE。在三个诊断和发现的时代中,Care4Rare 联盟使用外显子组测序,最近还使用基因组和其他“组学”技术来确定未解决的 RD 的分子原因。我们的诊断率达到了 34%(623/1806 个参与家庭),包括在 121 个以前与疾病无关的基因中发现有害变异,我们还在继续研究 145 个家庭中 121 个新基因的候选变异。该联盟为 RD 研究做出了重大贡献,包括开发数据收集和共享平台,并发起了一个加拿大网络,以促进对新基因的功能特征研究。该联盟为在加拿大实施全基因组测序作为 RD 诊断的公共资助测试做出了重要贡献。尽管过去十年取得了成功,但解决所有 RD 的挑战仍然巨大,工作远未完成。我们必须利用临床和“组学”数据进行二次利用,开发工具和政策以支持安全的数据共享,继续探索新出现技术的实用性,并优化研究方案以阐明复杂的疾病机制。需要在这些领域中的每一个领域中采用成功的方法,才能为所有 RD 家庭提供明确的诊断。

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本文引用的文献

1
Comparing genome sequencing technologies to improve rare disease diagnostics: a protocol for the evaluation of a pilot project, Genome-wide Sequencing Ontario.比较基因组测序技术以改善罕见病诊断:安大略省全基因组测序试点项目评估方案。
CMAJ Open. 2022 May 24;10(2):E460-E465. doi: 10.9778/cmajo.20210272. Print 2022 Apr-Jun.
2
Seven years since the launch of the Matchmaker Exchange: The evolution of genomic matchmaking.精准医学匹配交换平台启动七周年:基因组匹配的发展。
Hum Mutat. 2022 Jun;43(6):659-667. doi: 10.1002/humu.24373. Epub 2022 May 10.
3
seqr: A web-based analysis and collaboration tool for rare disease genomics.seqr:一个用于罕见病基因组学的基于网络的分析和协作工具。
Hum Mutat. 2022 Jun;43(6):698-707. doi: 10.1002/humu.24366. Epub 2022 Mar 21.
4
Genomics4RD: An integrated platform to share Canadian deep-phenotype and multiomic data for international rare disease gene discovery.Genomics4RD:一个整合的平台,用于共享加拿大的深度表型和多组学数据,以发现国际罕见病基因。
Hum Mutat. 2022 Jun;43(6):800-811. doi: 10.1002/humu.24354. Epub 2022 Mar 9.
5
The RD-Connect Genome-Phenome Analysis Platform: Accelerating diagnosis, research, and gene discovery for rare diseases.RD-Connect基因组-表型分析平台:加速罕见病的诊断、研究和基因发现。
Hum Mutat. 2022 Jun;43(6):717-733. doi: 10.1002/humu.24353.
6
The impact of GeneMatcher on international data sharing and collaboration.基因匹配器对国际数据共享与合作的影响。
Hum Mutat. 2022 Jun;43(6):668-673. doi: 10.1002/humu.24350. Epub 2022 Mar 28.
7
PhenomeCentral: 7 years of rare disease matchmaking.表型中心:7 年罕见病匹配。
Hum Mutat. 2022 Jun;43(6):674-681. doi: 10.1002/humu.24348. Epub 2022 Feb 22.
8
Centers for Mendelian Genomics: A decade of facilitating gene discovery.孟德尔基因组医学中心:十年来推动基因发现。
Genet Med. 2022 Apr;24(4):784-797. doi: 10.1016/j.gim.2021.12.005. Epub 2022 Feb 9.
9
DECIPHER: Supporting the interpretation and sharing of rare disease phenotype-linked variant data to advance diagnosis and research.DECIPHER:支持解读和共享罕见病表型相关变异数据,以推动诊断和研究。
Hum Mutat. 2022 Jun;43(6):682-697. doi: 10.1002/humu.24340. Epub 2022 Feb 21.
10
GA4GH: International policies and standards for data sharing across genomic research and healthcare.全球基因组与健康联盟(GA4GH):跨基因组研究与医疗保健领域数据共享的国际政策与标准。
Cell Genom. 2021 Nov 10;1(2). doi: 10.1016/j.xgen.2021.100029.