Department of Biological Sciences and NUS Centre for Bio-Imaging Sciences, National University of Singapore, Singapore, Singapore.
Department of Biological Sciences and NUS Centre for Bio-Imaging Sciences, National University of Singapore, Singapore, Singapore; Department of Chemistry, National University of Singapore, Singapore, Singapore.
Biophys J. 2022 Dec 6;121(23):4452-4466. doi: 10.1016/j.bpj.2022.11.003. Epub 2022 Nov 5.
Number and brightness (N&B) analysis is a fluorescence spectroscopy technique to quantify oligomerization of the mobile fraction of proteins. Accurate results, however, rely on a good knowledge of nonfluorescent states of the fluorescent labels, especially of fluorescent proteins, which are widely used in biology. Fluorescent proteins have been characterized for confocal, but not camera-based, N&B, which allows, in principle, faster measurements over larger areas. Here, we calibrate camera-based N&B implemented on a total internal reflection fluorescence microscope for various fluorescent proteins by determining their propensity to be fluorescent. We then apply camera-based N&B in live CHO-K1 cells to determine the oligomerization state of the epidermal growth factor receptor (EGFR), a transmembrane receptor tyrosine kinase that is a crucial regulator of cell proliferation and survival with implications in many cancers. EGFR oligomerization in resting cells and its regulation by the plasma membrane microenvironment are still under debate. Therefore, we investigate the effects of extrinsic factors, including membrane organization, cytoskeletal structure, and ligand stimulation, and intrinsic factors, including mutations in various EGFR domains, on the receptor's oligomerization. Our results demonstrate that EGFR oligomerization increases with removal of cholesterol or sphingolipids or the disruption of GM3-EGFR interactions, indicating raft association. However, oligomerization is not significantly influenced by the cytoskeleton. Mutations in either I706/V948 residues or E685/E687/E690 residues in the kinase and juxtamembrane domains, respectively, lead to a decrease in oligomerization, indicating their necessity for EGFR dimerization. Finally, EGFR phosphorylation is oligomerization dependent, involving the extracellular domain (550-580 residues). Coupled with biochemical investigations, camera-based N&B indicates that EGFR oligomerization and phosphorylation are the outcomes of several molecular interactions involving the lipid content and structure of the cell membrane and multiple residues in the kinase, juxtamembrane, and extracellular domains.
N&B 分析是一种荧光光谱技术,用于定量蛋白质的可动部分的寡聚化。然而,准确的结果依赖于对荧光标记物(尤其是在生物学中广泛使用的荧光蛋白)的非荧光状态的良好了解。荧光蛋白已被用于共聚焦的特性分析,但尚未用于基于相机的 N&B 分析,后者原则上允许在更大的区域内进行更快的测量。在这里,我们通过确定它们的荧光倾向,为各种荧光蛋白校准基于相机的 N&B,该技术是在全内反射荧光显微镜上实现的。然后,我们将基于相机的 N&B 应用于活 CHO-K1 细胞中,以确定表皮生长因子受体(EGFR)的寡聚化状态,EGFR 是一种跨膜受体酪氨酸激酶,是细胞增殖和存活的关键调节剂,与许多癌症有关。EGFR 在静止细胞中的寡聚化及其受质膜微环境的调节仍存在争议。因此,我们研究了包括膜组织、细胞骨架结构和配体刺激等外在因素以及包括各种 EGFR 结构域中的突变等内在因素对受体寡聚化的影响。我们的结果表明,随着胆固醇或鞘脂的去除或 GM3-EGFR 相互作用的破坏,EGFR 的寡聚化增加,表明与筏相关。然而,寡聚化不受细胞骨架的显著影响。激酶和近膜结构域中的 I706/V948 残基或 E685/E687/E690 残基的突变分别导致寡聚化减少,表明它们是 EGFR 二聚化所必需的。最后,EGFR 的磷酸化与寡聚化相关,涉及细胞外结构域(550-580 个残基)。与生化研究相结合,基于相机的 N&B 表明,EGFR 的寡聚化和磷酸化是涉及质膜的脂质含量和结构以及激酶、近膜和细胞外结构域中的多个残基的几种分子相互作用的结果。