Singhal Ankush, Sevink G J Agur
Leiden Institute of Chemistry, Leiden University, P.O. Box 9502, 2300 RA Leiden, The Netherlands.
Nanomaterials (Basel). 2022 Nov 1;12(21):3859. doi: 10.3390/nano12213859.
The continuous release of engineered nanomaterial (ENM) into the environment may bring about health concerns following human exposure. One important source of ENMs are silver nanoparticles (NPs) that are extensively used as anti-bacterial additives. The introduction of ENMs into the human body can occur via ingestion, skin uptake or the respiratory system. Therefore, evaluating how NPs translocate over bio-membranes is essential in assessing their primary toxicity. Unfortunately, data regarding membrane-NP interaction is still scarce, as is theoretical and in silico insight into what governs adhesion and translocation for the most relevant NPs and membranes. Coarse-grained (CG) molecular descriptions have the potential to alleviate this situation, but are hampered by the absence of a direct link to NP materials and membrane adhesion mechanisms. Here, we interrogate the relationship between the most common NP representation at the CG level and the adhesion characteristics of a model lung membrane. We find that this representation for silver NPs is non-transferable, meaning that a proper CG representation for one size is not suited for other sizes. We also identify two basic types of primary adhesion-(partial) NPs wrapping by the membrane and NP insertion into the membrane-that closely relate to the overall NP hydrophobicity and significantly differ in terms of lipid coatings. The proven non-transferability of the standard CG representation with size forms an inspiration for introducing a core-shell model even for bare NPs that are uniform in composition. Using existing all-atom molecular dynamics (MD) data as a reference, we show that this extension does allow us to reproduce size-dependent NP adhesion properties and lipid responses to NP binding at the CG level. The subsequent CGMD evaluation for 10 nm Ag NPs provides new insight into membrane binding for relevant NP sizes and into the role of water in trapping NPs into defected mixed monolayer-bilayer states. This development will be instrumental for simulating NP-membrane adhesion towards more experimentally relevant length and time scales for particular NP materials.
工程纳米材料(ENM)持续释放到环境中,可能会在人类接触后引发健康问题。ENM的一个重要来源是被广泛用作抗菌添加剂的银纳米颗粒(NP)。ENM进入人体的途径包括摄入、皮肤吸收或呼吸系统。因此,评估NP如何跨生物膜转运对于评估其主要毒性至关重要。不幸的是,关于膜与NP相互作用的数据仍然很少,对于最相关的NP和膜,其粘附和转运的理论及计算机模拟见解也很匮乏。粗粒度(CG)分子描述有潜力缓解这种情况,但由于缺乏与NP材料和膜粘附机制的直接联系而受到阻碍。在这里,我们探究了CG水平上最常见的NP表示与模型肺膜的粘附特性之间的关系。我们发现银NP的这种表示是不可转移的,这意味着一种尺寸的合适CG表示不适用于其他尺寸。我们还确定了两种基本的初始粘附类型——膜对(部分)NP的包裹和NP插入膜中——这与NP的整体疏水性密切相关,并且在脂质涂层方面有显著差异。标准CG表示随尺寸的不可转移性为引入即使对于成分均匀的裸NP的核壳模型提供了灵感。以现有的全原子分子动力学(MD)数据为参考,我们表明这种扩展确实使我们能够在CG水平上重现尺寸依赖性NP粘附特性以及脂质对NP结合的反应。随后对10 nm银NP的CGMD评估为相关NP尺寸的膜结合以及水在将NP捕获到有缺陷的混合单层 - 双层状态中的作用提供了新的见解。这一进展将有助于针对特定NP材料在更符合实验的长度和时间尺度上模拟NP - 膜粘附。