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IEEE Open J Ultrason Ferroelectr Freq Control. 2021;1:21-36. doi: 10.1109/OJUFFC.2021.3130021. Epub 2021 Nov 22.
2
A comparative review on heart ion channels, action potentials and electrocardiogram in rodents and human: extrapolation of experimental insights to clinic.啮齿动物和人类心脏离子通道、动作电位及心电图的比较综述:将实验见解外推至临床
Lab Anim Res. 2021 Sep 8;37(1):25. doi: 10.1186/s42826-021-00102-3.
3
Quantitative roles of ion channel dynamics on ventricular action potential.离子通道动力学对心室动作电位的定量作用。
Channels (Austin). 2021 Dec;15(1):465-482. doi: 10.1080/19336950.2021.1940628.
4
Artificial neural network model for predicting changes in ion channel conductance based on cardiac action potential shapes generated via simulation.基于通过模拟生成的心脏动作电位形状预测离子通道电导变化的人工神经网络模型。
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5
Reduction of quantitative systems pharmacology models using artificial neural networks.基于人工神经网络的定量系统药理学模型简化。
J Pharmacokinet Pharmacodyn. 2021 Aug;48(4):509-523. doi: 10.1007/s10928-021-09742-3. Epub 2021 Mar 2.
6
Mathematical model of the ventricular action potential and effects of isoproterenol-induced cardiac hypertrophy in rats.心室动作电位的数学模型及异丙肾上腺素诱导的大鼠心脏肥厚的作用。
Eur Biophys J. 2020 Jul;49(5):323-342. doi: 10.1007/s00249-020-01439-8. Epub 2020 May 27.
7
Considering discrepancy when calibrating a mechanistic electrophysiology model.考虑在对机制电生理学模型进行校准时的差异。
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8
Calibration of ionic and cellular cardiac electrophysiology models.离子和细胞心脏电生理学模型的校准。
Wiley Interdiscip Rev Syst Biol Med. 2020 Jul;12(4):e1482. doi: 10.1002/wsbm.1482. Epub 2020 Feb 21.
9
Four Ways to Fit an Ion Channel Model.四种拟合离子通道模型的方法。
Biophys J. 2019 Dec 17;117(12):2420-2437. doi: 10.1016/j.bpj.2019.08.001. Epub 2019 Aug 6.
10
Uncertainty and variability in models of the cardiac action potential: Can we build trustworthy models?心脏动作电位模型中的不确定性和变异性:我们能否构建可靠的模型?
J Mol Cell Cardiol. 2016 Jul;96:49-62. doi: 10.1016/j.yjmcc.2015.11.018. Epub 2015 Dec 2.

利用人工神经网络从动作电位波形估算离子电流的初步研究。

A pilot study of ion current estimation by ANN from action potential waveforms.

机构信息

Department of Engineering, Industrial Engineering, Antalya Bilim University, Döşemealtı, Antalya, Turkey.

Department of Engineering, Electrical and Computer Engineering, Antalya Bilim University, Döşemealtı, Antalya, Turkey.

出版信息

J Biol Phys. 2022 Dec;48(4):461-475. doi: 10.1007/s10867-022-09619-7. Epub 2022 Nov 14.

DOI:10.1007/s10867-022-09619-7
PMID:36372807
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9727005/
Abstract

Experiments using conventional experimental approaches to capture the dynamics of ion channels are not always feasible, and even when possible and feasible, some can be time-consuming. In this work, the ionic current-time dynamics during cardiac action potentials (APs) are predicted from a single AP waveform by means of artificial neural networks (ANNs). The data collection is accomplished by the use of a single-cell model to run electrophysiological simulations in order to identify ionic currents based on fluctuations in ion channel conductance. The relevant ionic currents, as well as the corresponding cardiac AP, are then calculated and fed into the ANN algorithm, which predicts the desired currents solely based on the AP curve. The validity of the proposed methodology for the Bayesian approach is demonstrated by the R (validation) scores obtained from training data, test data, and the entire data set. The Bayesian regularization's (BR) strength and dependability are further supported by error values and the regression presentations, all of which are positive indicators. As a result of the high convergence between the simulated currents and the currents generated by including the efficacy of a developed Bayesian solver, it is possible to generate behavior of ionic currents during time for the desired AP waveform for any electrical excitable cell.

摘要

使用传统实验方法来捕捉离子通道动力学的实验并不总是可行的,即使可行,有些也可能很耗时。在这项工作中,通过人工神经网络(ANNs)从单个动作电位(AP)波形预测离子电流-时间动力学。通过使用单细胞模型进行电生理模拟来完成数据收集,以便根据离子通道电导的波动来识别离子电流。然后计算相关的离子电流以及相应的心脏 AP,并将其输入到 ANN 算法中,该算法仅根据 AP 曲线预测所需的电流。通过从训练数据、测试数据和整个数据集获得的 R(验证)分数,证明了所提出的贝叶斯方法的有效性。BR 的强度和可靠性还得到了误差值和回归演示的支持,所有这些都是积极的指标。由于包括开发的贝叶斯求解器的功效在内的模拟电流与生成的电流之间的高度一致性,因此可以为任何电兴奋细胞生成所需 AP 波形的时间内的离子电流行为。