Department of Engineering, Industrial Engineering, Antalya Bilim University, Döşemealtı, Antalya, Turkey.
Department of Engineering, Electrical and Computer Engineering, Antalya Bilim University, Döşemealtı, Antalya, Turkey.
J Biol Phys. 2022 Dec;48(4):461-475. doi: 10.1007/s10867-022-09619-7. Epub 2022 Nov 14.
Experiments using conventional experimental approaches to capture the dynamics of ion channels are not always feasible, and even when possible and feasible, some can be time-consuming. In this work, the ionic current-time dynamics during cardiac action potentials (APs) are predicted from a single AP waveform by means of artificial neural networks (ANNs). The data collection is accomplished by the use of a single-cell model to run electrophysiological simulations in order to identify ionic currents based on fluctuations in ion channel conductance. The relevant ionic currents, as well as the corresponding cardiac AP, are then calculated and fed into the ANN algorithm, which predicts the desired currents solely based on the AP curve. The validity of the proposed methodology for the Bayesian approach is demonstrated by the R (validation) scores obtained from training data, test data, and the entire data set. The Bayesian regularization's (BR) strength and dependability are further supported by error values and the regression presentations, all of which are positive indicators. As a result of the high convergence between the simulated currents and the currents generated by including the efficacy of a developed Bayesian solver, it is possible to generate behavior of ionic currents during time for the desired AP waveform for any electrical excitable cell.
使用传统实验方法来捕捉离子通道动力学的实验并不总是可行的,即使可行,有些也可能很耗时。在这项工作中,通过人工神经网络(ANNs)从单个动作电位(AP)波形预测离子电流-时间动力学。通过使用单细胞模型进行电生理模拟来完成数据收集,以便根据离子通道电导的波动来识别离子电流。然后计算相关的离子电流以及相应的心脏 AP,并将其输入到 ANN 算法中,该算法仅根据 AP 曲线预测所需的电流。通过从训练数据、测试数据和整个数据集获得的 R(验证)分数,证明了所提出的贝叶斯方法的有效性。BR 的强度和可靠性还得到了误差值和回归演示的支持,所有这些都是积极的指标。由于包括开发的贝叶斯求解器的功效在内的模拟电流与生成的电流之间的高度一致性,因此可以为任何电兴奋细胞生成所需 AP 波形的时间内的离子电流行为。