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贝叶斯推理定量和数学建模可溶性腺苷酸环化酶对人内皮细胞细胞周期的影响。

Quantifying and mathematical modelling of the influence of soluble adenylate cyclase on cell cycle in human endothelial cells with Bayesian inference.

机构信息

Institut für Physiologie, Medizinische Fakultät Carl Gustav Carus, Technische Universität Dresden, Dresden, Germany.

Vivantes Klinikum im Friedrichshain, Charité Academic Teaching Hospital, Klinik für Neurochirurgie, Berlin, Germany.

出版信息

J Cell Mol Med. 2022 Dec;26(23):5887-5900. doi: 10.1111/jcmm.17611. Epub 2022 Nov 13.

Abstract

Adenosine-3', 5'-cyclic monophosphate (cAMP) produced by adenylate cyclases (ADCYs) is an established key regulator of cell homoeostasis. However, its role in cell cycle control is still controversially discussed. This study focussed on the impact of soluble HCO -activated ADCY10 on cell cycle progression. Effects are quantified with Bayesian inference integrating a mathematical model and experimental data. The activity of ADCY10 in human umbilical vein endothelial cells (HUVECs) was either pharmacologically inhibited by KH7 or endogenously activated by HCO . Cell numbers of individual cell cycle phases were assessed over time using flow cytometry. Based on these numbers, cell cycle dynamics were analysed using a mathematical model. This allowed precise quantification of cell cycle dynamics with model parameters that describe the durations of individual cell cycle phases. Endogenous inactivation of ADCY10 resulted in prolongation of mean cell cycle times (38.7 ± 8.3 h at 0 mM HCO vs 30.3 ± 2.7 h at 24 mM HCO ), while pharmacological inhibition resulted in functional arrest of cell cycle by increasing mean cell cycle time after G /G synchronization to 221.0 ± 96.3 h. All cell cycle phases progressed slower due to ADCY10 inactivation. In particular, the G -S transition was quantitatively the most influenced by ADCY10. In conclusion, the data of the present study show that ADCY10 is a key regulator in cell cycle progression linked specifically to the G -S transition.

摘要

腺苷酸-3',5'-环单磷酸(cAMP)由腺苷酸环化酶(ADCYs)产生,是细胞内稳态的一个既定关键调节剂。然而,它在细胞周期调控中的作用仍存在争议。本研究重点关注可溶性 HCO3-激活的 ADCY10 对细胞周期进程的影响。使用贝叶斯推理整合数学模型和实验数据来量化这些影响。通过 KH7 药理学抑制或 HCO3-内源性激活来调节人脐静脉内皮细胞(HUVECs)中 ADACY10 的活性。使用流式细胞术随时间评估单个细胞周期阶段的细胞数量。基于这些数字,使用数学模型分析细胞周期动态。这允许使用描述单个细胞周期阶段持续时间的模型参数来精确量化细胞周期动态。ADCY10 的内源性失活导致平均细胞周期时间延长(0 mM HCO3-时为 38.7±8.3 h,24 mM HCO3-时为 30.3±2.7 h),而药理学抑制通过在 G1/G1 同步后增加平均细胞周期时间至 221.0±96.3 h,导致细胞周期功能停滞。由于 ADCY10 失活,所有细胞周期阶段进展都较慢。特别是,G1/S 过渡受到 ADCY10 的定量影响最大。总之,本研究的数据表明,ADCY10 是细胞周期进展的关键调节剂,与 G1/S 过渡特异性相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aaf8/9716222/e745cf3a812b/JCMM-26-5887-g006.jpg

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