Midkiff Daniel F, Huayta Javier, Lichty James D, Crapster Joseph P, San-Miguel Adriana
Department of Chemical and Biomolecular Engineering, North Carolina State University, Raleigh, NC 27695, USA.
iScience. 2022 Oct 28;25(11):105460. doi: 10.1016/j.isci.2022.105460. eCollection 2022 Nov 18.
Genetic screens are widely used to identify genes that control specific biological functions. In forward genetic screens rely on the isolation of reproductively active mutants that can self-propagate clonal populations. Screens that target post-reproductive phenotypes, such as lifespan, are thus challenging. We combine microfluidic technologies and image processing to perform high-throughput automated screening for short-lived mutants using protein aggregation as a marker for aging. We take advantage of microfluidics for maintaining a reproductively active adult mutagenized population and for performing serial high-throughput analysis and sorting of animals with increased protein aggregation, using fluorescently-labeled PAB-1 as a readout. We demonstrate that lifespan mutants can be identified by screening for accelerated protein aggregation through quantitative analysis of fluorescently labeled aggregates while avoiding conditional sterilization or manual separation of parental and progeny populations. We also show that aged wildtypes and premature aggregation mutants differ in aggregate morphology, suggesting aggregate growth is time-dependent.
遗传筛选被广泛用于鉴定控制特定生物学功能的基因。正向遗传筛选依赖于分离能够自我繁殖克隆群体的生殖活性突变体。因此,针对诸如寿命等生殖后表型的筛选具有挑战性。我们结合微流控技术和图像处理,以蛋白质聚集作为衰老标记,对短命突变体进行高通量自动筛选。我们利用微流控技术来维持一个具有生殖活性的成年诱变群体,并对蛋白质聚集增加的动物进行连续高通量分析和分选,使用荧光标记的PAB-1作为读数。我们证明,通过对荧光标记聚集体进行定量分析来筛选加速的蛋白质聚集,同时避免条件性绝育或亲代与子代群体的手动分离,就可以鉴定寿命突变体。我们还表明,衰老的野生型和过早聚集突变体在聚集体形态上有所不同,这表明聚集体生长是时间依赖性的。