Siegel David, Harris Peter S, Michel Cole R, de Cabo Rafael, Fritz Kristofer S, Ross David
Department of Pharmaceutical Sciences, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of Colorado Anschutz Medical Campus, Aurora, CO, United States.
Mass Spectrometry Facility, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of Colorado Anschutz Medical Campus, Aurora, CO, United States.
Front Pharmacol. 2022 Nov 2;13:1015642. doi: 10.3389/fphar.2022.1015642. eCollection 2022.
The stress induced protein NQO1 can participate in a wide range of biological pathways which are dependent upon the interaction of NQO1 with protein targets. Many of the protein-protein interactions involving NQO1 have been shown to be regulated by the pyridine nucleotide redox balance. NQO1 can modify its conformation as a result of redox changes in pyridine nucleotides and sites on the C-terminal and helix seven regions of NQO1 have been identified as potential areas that may be involved in redox-dependent protein-protein interactions. Since post-translational modifications can modify the functionality of proteins, we examined whether redox-dependent conformational changes induced in NQO1 would alter lysine acetylation. Recombinant NQO1 was incubated with and without NADH then acetylated non-enzymatically by acetic anhydride or S-acetylglutathione (Ac-GSH). NQO1 acetylation was determined by immunoblot and site-specific lysine acetylation was quantified by mass spectrometry (MS). NQO1 was readily acetylated by acetic anhydride and Ac-GSH. Interestingly, despite a large number of lysine residues (9%) in NQO1 only a small subset of lysines were acetylated and the majority of these were located in or near the functional C-terminal or helix seven regions. Reduction of NQO1 by NADH prior to acetylation resulted in almost complete protection of NQO1 from lysine acetylation as confirmed by immunoblot analysis and MS. Lysines located within the redox-active C-terminus and helix seven regions were readily acetylated when NQO1 was in an oxidized conformation but were protected from acetylation when NQO1 was in the reduced conformation. To investigate regulatory mechanisms of enzymatic deacetylation, NQO1 was acetylated by Ac-GSH then exposed to purified sirtuins (SIRT 1-3) or histone deacetylase 6 (HDAC6). NQO1 could be deacetylated by all sirtuin isoforms and quantitative MS analysis performed using SIRT2 revealed very robust deacetylation of NQO1, specifically at K and K in the C-terminal region. No deacetylation of NQO1 by HDAC6 was detected. These data demonstrate that the same subset of key lysine residues in the C-terminal and helix seven regions of NQO1 undergo redox dependent acetylation and are regulated by sirtuin-mediated deacetylation.
应激诱导蛋白NQO1可参与多种生物学途径,这些途径依赖于NQO1与蛋白质靶点的相互作用。许多涉及NQO1的蛋白质-蛋白质相互作用已被证明受吡啶核苷酸氧化还原平衡的调节。由于吡啶核苷酸的氧化还原变化,NQO1可改变其构象,并且已确定NQO1 C末端和螺旋7区域的位点是可能参与氧化还原依赖性蛋白质-蛋白质相互作用的潜在区域。由于翻译后修饰可改变蛋白质的功能,我们研究了NQO1中诱导的氧化还原依赖性构象变化是否会改变赖氨酸乙酰化。将重组NQO1在有和没有NADH的情况下孵育,然后用乙酸酐或S-乙酰谷胱甘肽(Ac-GSH)进行非酶促乙酰化。通过免疫印迹法测定NQO1的乙酰化,并通过质谱(MS)对位点特异性赖氨酸乙酰化进行定量。NQO1很容易被乙酸酐和Ac-GSH乙酰化。有趣的是,尽管NQO1中有大量赖氨酸残基(9%),但只有一小部分赖氨酸被乙酰化,其中大部分位于功能性C末端或螺旋7区域内或附近。免疫印迹分析和MS证实,在乙酰化之前用NADH还原NQO1几乎完全保护NQO1不被赖氨酸乙酰化。当NQO1处于氧化构象时,位于氧化还原活性C末端和螺旋7区域内的赖氨酸很容易被乙酰化,但当NQO1处于还原构象时则受到乙酰化保护。为了研究酶促去乙酰化的调节机制,将NQO1用Ac-GSH乙酰化,然后暴露于纯化的沉默调节蛋白(SIRT 1-3)或组蛋白去乙酰化酶6(HDAC6)。NQO1可被所有沉默调节蛋白亚型去乙酰化,使用SIRT2进行的定量MS分析显示NQO1有很强的去乙酰化作用,特别是在C末端区域的K和K处。未检测到HDAC6对NQO1的去乙酰化作用。这些数据表明,NQO1 C末端和螺旋7区域中相同的关键赖氨酸残基子集经历氧化还原依赖性乙酰化,并受沉默调节蛋白介导的去乙酰化作用调节。