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HSPA8 是三阴性乳腺癌的一个新的预后和免疫浸润相关的生物标志物。

HSPA8 Is a New Biomarker of Triple Negative Breast Cancer Related to Prognosis and Immune Infiltration.

机构信息

Department of Breast Surgery, Affiliated Cancer Hospital of Xinjiang Medical University, Urumqi, China.

Yanqing District Hospital of Traditional Chinese Medicine, Beijing, China.

出版信息

Dis Markers. 2022 Nov 21;2022:8446857. doi: 10.1155/2022/8446857. eCollection 2022.

Abstract

OBJECTIVE

Triple negative breast cancer (TNBC) is a kind of cancer that endangers the lives of women all over the world in the 21st century. Heat shock protein member 8 (HSPA8) is the chaperone gene of the heat shock protein family. It is involved in many cellular functions. For example, it promotes the circulation between ATP and ADP, participates in protein folding, and can change the vitality of the cell and inhibit its growth. However, the abnormal expression of HSPA8 gene in TNBC and its diagnostic and prognostic significance still need to be further studied.

METHODS

First, we used related databases (such as TCGA, GEO, GTEx, ONCOMINE, TIMER2.0, UALCAN, HPA, STRING, CCLE, and Kaplan-Meier plotter databases) to analyze the relationship between HSPA8 and TNBC by bioinformatics. Then, the analysis using only a small part of the experimental work is used to explain our findings. For example, HSPA8 protein expression was evaluated by immunohistochemical method in TNBC tissues. Western blotting experiments were carried out to verify the results. Then, the clinicopathological characteristics of patients with TNBC were analyzed by R software and Cox regression analysis. On the basis, a nomogram is constructed to estimate the 1-, 3-, and 5-year overall survival (OS). The prognostic nomogram performance was calibrated and evaluated by the calibration curve and receiver operating characteristic (ROC) curve.

RESULTS

In the study, we analyzed the three GEO databases (including GSE86945, GSE106977, and GSE102088) and found that HSPA8 is one of the central genes of TNBC. Then, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) researches indicated that HSPA8 was mainly involved in partner-mediated autophagy, mRNA catabolism, neutrophil activation, immune response, protein targeting, RNA splicing, RNA catabolism, and other biological processes. Next, we used bioinformatics technology to find that the expression level of HSPA8 in breast cancer (BC) and TNBC samples was significantly higher than that in normal breast tissues, which was determined by analyzing hospital patient samples and related experiments. In addition, the expression level of HSPA8 in BC and TNBC samples was significantly correlated with clinical indexes such as TNM stage. The Cox analysis revealed that the expression of HSPA8 in TNBC had significant clinical prognostic value. The results of nomogram and ROC test show that HSPA8 has significant predictive ability in TNBC. The results of immune infiltration of HSPA8 through the TIMER2.0 database showed that there was a significant correlation between HSPA8 and immune cell subsets.

CONCLUSIONS

Our results show that the expression of HSPA8 in TNBC has important clinical diagnostic significance and clarify the potential molecular mechanism that promotes the evolution of TNBC. The high expression of HSPA8 may be related with the poor clinical outcome of TNBC. This helps to provide us with a new direction of TNBC targeted therapy.

摘要

目的

三阴性乳腺癌(TNBC)是 21 世纪危害全球女性生命的一种癌症。热休克蛋白家族成员 8(HSPA8)是热休克蛋白的伴侣基因。它参与许多细胞功能。例如,它促进 ATP 和 ADP 之间的循环,参与蛋白质折叠,并能改变细胞活力,抑制其生长。然而,HSPA8 基因在 TNBC 中的异常表达及其诊断和预后意义仍需进一步研究。

方法

首先,我们使用相关数据库(如 TCGA、GEO、GTEx、ONCOMINE、TIMER2.0、UALCAN、HPA、STRING、CCLE 和 Kaplan-Meier plotter 数据库)通过生物信息学分析 HSPA8 与 TNBC 的关系。然后,使用仅一小部分实验工作的分析来解释我们的发现。例如,通过免疫组织化学方法评估 TNBC 组织中的 HSPA8 蛋白表达。通过 Western blot 实验验证结果。然后,使用 R 软件和 Cox 回归分析分析 TNBC 患者的临床病理特征。在此基础上,构建一个列线图来估计 1、3 和 5 年的总生存率(OS)。通过校准曲线和接收者操作特征(ROC)曲线对预后列线图的性能进行校准和评估。

结果

在研究中,我们分析了三个 GEO 数据库(包括 GSE86945、GSE106977 和 GSE102088),发现 HSPA8 是 TNBC 的核心基因之一。然后,基因本体论(GO)和京都基因与基因组百科全书(KEGG)研究表明,HSPA8 主要参与伴侣介导的自噬、mRNA 分解代谢、嗜中性粒细胞激活、免疫反应、蛋白质靶向、RNA 剪接、RNA 分解代谢等生物学过程。接下来,我们使用生物信息学技术发现 HSPA8 在乳腺癌(BC)和 TNBC 样本中的表达水平明显高于正常乳腺组织,这是通过分析医院患者样本和相关实验确定的。此外,HSPA8 在 BC 和 TNBC 样本中的表达水平与 TNM 分期等临床指标明显相关。Cox 分析表明,HSPA8 在 TNBC 中的表达具有显著的临床预后价值。列线图和 ROC 测试的结果表明 HSPA8 在 TNBC 中具有显著的预测能力。通过 TIMER2.0 数据库进行 HSPA8 免疫浸润的结果表明,HSPA8 与免疫细胞亚群之间存在显著相关性。

结论

我们的结果表明,HSPA8 在 TNBC 中的表达具有重要的临床诊断意义,并阐明了促进 TNBC 演变的潜在分子机制。HSPA8 的高表达可能与 TNBC 的不良临床结局有关。这有助于为 TNBC 的靶向治疗提供新的方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5688/9705114/241f7474226c/DM2022-8446857.001.jpg

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