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从动物饲料中分离的菌株的分子特征。

Molecular Characterization of Strains Isolated from Animal Feeds.

机构信息

Laboratory of Plant Resources Valorization and Food Safety in Semi-Arid Areas of Southwestern Algeria, Department of Biology, University of Bechar, Bechar, Algeria.

USC 1450 INRAE/UGA Lentiviral Pathogenesis and Vaccination Laboratory, Department of Biology, University of Grenoble Alpes, Saint-Martin-d'Hères, France.

出版信息

Pol J Microbiol. 2022 Dec 21;71(4):589-599. doi: 10.33073/pjm-2022-048. eCollection 2022 Dec 1.

Abstract

Aflatoxin (AF)-producing fungi such as commonly contaminate animal feeds, causing high economic losses. is the most prevalent and produces AFB1, a potent mutagen, and carcinogen threatening human and animal health. is a large group of closely related fungi sharing number of morphological and genetic similarities that complicate the diagnosis of highly pathogenic strains. We used here morphological and molecular assays to characterize fungal isolates from animal feeds in Southwestern Algeria. These tools helped to identify 20 out of 30 strains, and 15 of them belonged to the section . Further analyses detected four out of 15 as belonging to group. PCR targeting the AF genes' intergenic region amplified a single 674 bp amplicon in all four isolates. The amplicons were digested with a II endonuclease, and three specific fragments were observed for but lacked two typical fragments. Sequencing data of four amplicons confirmed the presence of the two II restriction sites yielding the three fragments, confirming that all four strains were . In addition, this analysis illustrated the genetic variability within the strains.

摘要

产黄曲霉毒素(AF)的真菌如 通常会污染动物饲料,造成巨大的经济损失。 是最普遍的一种,可产生 AFB1,这是一种强有力的诱变剂和致癌物,威胁着人类和动物的健康。 是一个大型的真菌群体,具有许多形态和遗传上的相似性,这使得高度致病性菌株的诊断变得复杂。我们在这里使用形态学和分子检测方法来鉴定来自阿尔及利亚西南部动物饲料中的真菌分离株。这些工具帮助鉴定了 30 株中的 20 株,其中 15 株属于 节。进一步的分析发现,15 株中有 4 株属于 组。针对 AF 基因间区的 PCR 扩增了所有 4 个分离株的单个 674 bp 扩增子。用 II 内切酶对扩增子进行消化,在 3 个分离株中观察到了 3 个特定的片段,但 缺失了两个典型的片段。4 个扩增子的测序数据证实了存在两个 II 限制位点,产生了 3 个片段,这证实了所有 4 个菌株都是 。此外,该分析还说明了 菌株内的遗传变异性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/852d/9944975/405a8bcbcacb/pjm-71-589-g001.jpg

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