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非洲猪瘟病毒(ASFV)感染的猪巨噬细胞转录组分析揭示了其与宿主之间复杂而紧密的关系。

Transcriptome Profiling in Swine Macrophages Infected with African Swine Fever Virus (ASFV) Uncovers the Complex and Close Relationship with Host.

作者信息

Li Zhaoyao, Chen Wenxian, Li Xiaowen, Wu Keke, Wang Xinyan, Wang Weijun, Li Yuwan, Yi Lin, Zhao Mingqiu, Ding Hongxing, Fan Shuangqi, Chen Jinding

机构信息

College of Veterinary Medicine, South China Agricultural University, Guangzhou 510642, China.

Guangdong Laboratory for Lingnan Modern Agriculture, Guangzhou 510642, China.

出版信息

Pathogens. 2022 Nov 24;11(12):1411. doi: 10.3390/pathogens11121411.

Abstract

African swine fever virus (ASFV) is a pathogen to cause devastating and economically significant diseases in domestic and feral swine. ASFV mainly infects macrophages and monocytes and regulates its replication process by affecting the content of cytokines in the infected cells. There is a limited understanding of host gene expression and differential profiles before and after ASFV infection in susceptible cells. In this study, RNA-seq technology was used to analyze the transcriptomic change in PAMs infected with ASFV at different time points (0 h, 12 h, 24 h). As a result, a total of 2748, 1570, and 560 genes were enriched in group V12 h vs. MOCK, V24 h vs. MOCK, and V24 h vs. V12 h, respectively. These DEGs (differentially expressed genes) in each group were mainly concentrated in the KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways related to innate immunization and inflammation, including the NF-κB signaling pathway, Toll-like receptor signaling pathway, TNF signaling pathway, IL-17 signaling pathway, cytokine-cytokine receptor interaction, and chemokine signaling pathway. Furthermore, the increased levels of IL-1β, TNF-α, IKKβ, CXCL2, and TRAF2 and decreased level of IκBα were validated through the qPCR method. These results suggested that ASFV infection can activate the NF-κB signaling pathway in the early stage. In general, this study provides a theoretical basis for further understanding the pathogenesis and immune escape mechanism of ASFV.

摘要

非洲猪瘟病毒(ASFV)是一种可在家猪和野猪中引发毁灭性且具有重大经济影响疾病的病原体。ASFV主要感染巨噬细胞和单核细胞,并通过影响被感染细胞中细胞因子的含量来调节其复制过程。目前对于ASFV感染易感细胞前后宿主基因表达和差异谱的了解有限。在本研究中,利用RNA测序技术分析了在不同时间点(0小时、12小时、24小时)感染ASFV的猪肺泡巨噬细胞(PAMs)的转录组变化。结果显示,在V12小时与MOCK组、V24小时与MOCK组以及V24小时与V12小时组中,分别共有2748个、1570个和560个基因得到富集。每组中的这些差异表达基因(DEGs)主要集中在与固有免疫和炎症相关的京都基因与基因组百科全书(KEGG)通路中,包括NF-κB信号通路、Toll样受体信号通路、TNF信号通路、IL-17信号通路、细胞因子-细胞因子受体相互作用以及趋化因子信号通路。此外,通过定量聚合酶链反应(qPCR)方法验证了IL-1β、TNF-α、IKKβ、CXCL2和TRAF2水平的升高以及IκBα水平的降低。这些结果表明,ASFV感染在早期可激活NF-κB信号通路。总体而言,本研究为进一步了解ASFV的发病机制和免疫逃逸机制提供了理论依据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/014c/9788513/fa5ada172765/pathogens-11-01411-g001.jpg

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