Medina Laura, Guzmán Fanny, Álvarez Claudio, Delgado Jean Paul, Carbonell-M Belfran
Grupo Genética, Regeneración y Cáncer, Facultad de Ciencias Exactas y Naturales, Instituto de Biología, Universidad de Antioquia, Medellín 050010, Colombia.
Núcleo de Biotecnología Curauma (NBC), Pontificia Universidad Católica de Valparaíso, Valparaíso 2373223, Chile.
Pharmaceutics. 2022 Nov 23;14(12):2579. doi: 10.3390/pharmaceutics14122579.
The discovery and improvements of antimicrobial peptides (AMPs) have become an alternative to conventional antibiotics. They are usually small and heat-stable peptides, exhibiting inhibitory activity against Gram-negative and Gram-positive bacteria. In this way, studies on broad-spectrum AMPs found in amphibians with the remarkable capability to regenerate a wide array of tissues are of particular interest in the search for new strategies to treat multidrug-resistant bacterial strains. In this work, the use of bioinformatic approaches such as sequence alignment with Fasta36 and prediction of antimicrobial activity allowed the identification of the Ramosin peptide from the de novo assembled transcriptome of the plethodontid salamander Bolitoglossa ramosi obtained from post-amputation of the upper limb tissue, heart, and intestine samples. BLAST analysis revealed that the Ramosin peptide sequence is unique in Bolitoglossa ramosi. The peptide was chemically synthesized, and physicochemical properties were characterized. Furthermore, the in vitro antimicrobial activity against relevant Gram-positive and Gram-negative human pathogenic bacteria was demonstrated. Finally, no effect against eukaryotic cells or human red blood cells was evidenced. This is the first antibacterial peptide identified from a Colombian endemic salamander with interesting antimicrobial properties and no hemolytic activity.
抗菌肽(AMPs)的发现与改进已成为传统抗生素的一种替代方案。它们通常是小的、热稳定的肽,对革兰氏阴性菌和革兰氏阳性菌均表现出抑制活性。因此,对具有显著多种组织再生能力的两栖动物中发现的广谱抗菌肽进行研究,在寻找治疗多重耐药细菌菌株的新策略方面具有特别的意义。在这项工作中,利用生物信息学方法,如使用Fasta36进行序列比对以及抗菌活性预测,从断肢后的上肢组织、心脏和肠道样本中从头组装的多齿螈科蝾螈(Bolitoglossa ramosi)转录组中鉴定出了拉莫辛肽。BLAST分析表明,拉莫辛肽序列在Bolitoglossa ramosi中是独特的。该肽经过化学合成,并对其理化性质进行了表征。此外,还证明了其对相关革兰氏阳性和革兰氏阴性人类病原菌的体外抗菌活性。最后,未发现其对真核细胞或人类红细胞有影响。这是首次从哥伦比亚特有蝾螈中鉴定出具有有趣抗菌特性且无溶血活性的抗菌肽。