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基于人诱导多能干细胞衍生心肌细胞的尖端扭转型室速预测模型的建立与验证

Establishment and validation of a torsade de pointes prediction model based on human iPSC‑derived cardiomyocytes.

作者信息

Pan Dongsheng, Li Bo, Wang Sanlong

机构信息

Graduate School of Peking Union Medical College, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, P.R. China.

National Center for Safety Evaluation of Drugs, National Institutes for Food and Drug Control, Beijing 100176, P.R. China.

出版信息

Exp Ther Med. 2022 Dec 9;25(1):61. doi: 10.3892/etm.2022.11760. eCollection 2023 Jan.

Abstract

Drug-induced cardiotoxicity is one of the main causes of drug failure, which leads to subsequent withdrawal from pharmaceutical development. Therefore, identifying the potential toxic candidate in the early stages of drug development is important. Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) are a useful tool for assessing candidate compounds for arrhythmias. However, a suitable model using hiPSC-CMs to predict the risk of torsade de pointes (TdP) has not been fully established. The present study aimed to establish a predictive TdP model based on hiPSC-CMs. In the current study, 28 compounds recommended by the Comprehensive Proarrhythmia Assay (CiPA) were used as training set and models were established in different risk groups, high- and intermediate-risk versus low-risk groups. Subsequently, six endpoints of electrophysiological responses were used as potential model predictors. Accuracy, sensitivity and area under the curve (AUC) were used as evaluation indices of the models and seven compounds with known TdP risk were used to verify model differentiation and calibration. The results showed that among the seven models, the AUC of logistic regression and AdaBoost model was higher and had little difference in both training and test sets, which indicated that the discriminative ability and model stability was good and excellent, respectively. Therefore, these two models were taken as submodels, similar weight was configured and a new TdP risk prediction model was constructed using a soft voting strategy. The classification accuracy, sensitivity and AUC of the new model were 0.93, 0.95 and 0.92 on the training set, respectively and all 1.00 on the test set, which indicated good discrimination ability on both training and test sets. The risk threshold was defined as 0.50 and the consistency between the predicted and observed results were 92.8 and 100% on the training and test sets, respectively. Overall, the present study established a risk prediction model for TdP based on hiPSC-CMs which could be an effective predictive tool for compound-induced arrhythmias.

摘要

药物性心脏毒性是药物研发失败的主要原因之一,会导致药物随后退出研发进程。因此,在药物研发早期识别潜在的毒性候选药物很重要。人诱导多能干细胞衍生的心肌细胞(hiPSC-CMs)是评估心律失常候选化合物的有用工具。然而,尚未完全建立一个使用hiPSC-CMs预测尖端扭转型室性心动过速(TdP)风险的合适模型。本研究旨在建立基于hiPSC-CMs的TdP预测模型。在本研究中,使用综合心律失常检测(CiPA)推荐的28种化合物作为训练集,并在不同风险组(高风险和中风险与低风险组)中建立模型。随后,将六个电生理反应终点用作潜在的模型预测指标。将准确性、敏感性和曲线下面积(AUC)用作模型的评估指标,并使用七种已知TdP风险的化合物来验证模型的区分能力和校准情况。结果显示,在七个模型中,逻辑回归模型和AdaBoost模型的AUC较高,在训练集和测试集中差异不大,这表明它们的区分能力良好,模型稳定性分别为优秀。因此,将这两个模型作为子模型,配置相似权重,并使用软投票策略构建了一个新的TdP风险预测模型。新模型在训练集上的分类准确性、敏感性和AUC分别为0.93、0.95和0.92,在测试集上均为1.00,这表明在训练集和测试集上都具有良好的区分能力。风险阈值定义为0.50,训练集和测试集上预测结果与观察结果之间的一致性分别为92.8%和100%。总体而言,本研究建立了基于hiPSC-CMs的TdP风险预测模型,该模型可能是化合物诱导心律失常的有效预测工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b614/9780517/f4e60efb72e0/etm-25-01-11760-g02.jpg

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