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植物特异性微管相关蛋白 Spiral2 的 C 末端结构域的晶体结构。

Crystal structure of the C-terminal domain of the plant-specific microtubule-associated protein Spiral2.

机构信息

Department of Medical Life Science, Yokohama City University, 1-7-29 Suehiro, Tsurumi, Yokohama, Kanagawa 230-0045, Japan.

出版信息

Acta Crystallogr F Struct Biol Commun. 2023 Jan 1;79(Pt 1):17-22. doi: 10.1107/S2053230X22011815.

Abstract

Plant cells form microtubule arrays, called `cortical microtubules', beneath the plasma membrane which are critical for cell-wall organization and directional cell growth. Cortical microtubules are nucleated independently of centrosomes. Spiral2 is a land-plant-specific microtubule minus-end-targeting protein that stabilizes the minus ends by inhibiting depolymerization of the filament. Spiral2 possesses an N-terminal microtubule-binding domain and a conserved C-terminal domain whose function is unknown. In this study, the crystal structure of the conserved C-terminal domain of Spiral2 was determined using the single-wavelength anomalous dispersion method. Refinement of the model to a resolution of 2.2 Å revealed a helix-turn-helix fold with seven α-helices. The protein crystallized as a dimer, but SEC-MALS analysis showed the protein to be monomeric. A structural homology search revealed that the protein has similarity to the C-terminal domain of the katanin regulatory subunit p80. The structure presented here suggests that the C-terminal domain of Spiral2 represents a new class of microtubule dynamics modulator across the kingdom.

摘要

植物细胞在质膜下形成微管阵列,称为“皮层微管”,对于细胞壁组织和定向细胞生长至关重要。皮层微管独立于中心体进行核化。螺旋 2 是一种陆地植物特异性微管负端靶向蛋白,通过抑制丝的解聚来稳定负端。螺旋 2 具有一个 N 端微管结合结构域和一个保守的 C 端结构域,其功能未知。在这项研究中,使用单波长异常分散法确定了螺旋 2 的保守 C 端结构域的晶体结构。将模型精修至 2.2 Å 的分辨率揭示了一个具有七个 α-螺旋的螺旋-转角-螺旋折叠。该蛋白以二聚体形式结晶,但 SEC-MALS 分析表明该蛋白为单体。结构同源性搜索表明,该蛋白与 katanin 调节亚基 p80 的 C 端结构域具有相似性。这里提出的结构表明,螺旋 2 的 C 端结构域代表了跨领域的一类新的微管动力学调节剂。

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本文引用的文献

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DALI and the persistence of protein shape.DALI 与蛋白质构象的稳定性。
Protein Sci. 2020 Jan;29(1):128-140. doi: 10.1002/pro.3749. Epub 2019 Nov 5.
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Microtubule minus-end regulation at a glance.微管负端调控速览。
J Cell Sci. 2019 Jun 7;132(11):jcs227850. doi: 10.1242/jcs.227850.
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Microtubule-severing enzymes: From cellular functions to molecular mechanism.微管切割酶:从细胞功能到分子机制。
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The Arabidopsis SPIRAL2 Protein Targets and Stabilizes Microtubule Minus Ends.拟南芥 SPIRAL2 蛋白靶向并稳定微管负端。
Curr Biol. 2018 Mar 19;28(6):987-994.e3. doi: 10.1016/j.cub.2018.02.014. Epub 2018 Mar 8.

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