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13C NMR studies of porphobilinogen synthase: observation of intermediates bound to a 280,000-dalton protein.

作者信息

Jaffe E K, Markham G D

机构信息

Department of Biochemistry, University of Pennsylvania School of Dental Medicine, Philadelphia 19104-6002.

出版信息

Biochemistry. 1987 Jul 14;26(14):4258-64. doi: 10.1021/bi00388a012.

DOI:10.1021/bi00388a012
PMID:3663587
Abstract

13C NMR has been used to observe the equilibrium complex of [4-13C]-5-aminolevulinate ([4-13C]ALA) bound to porphobilinogen (PBG) synthase (5-aminolevulinate dehydratase), a 280,000-dalton protein. [4-13C]ALA (chemical shift = 205.9 ppm) forms [3,5-13C]PBG (chemical shifts = 121.0 and 123.0 ppm). PBG prepared from a mixture of [4-13C]ALA and [15N]ALA was used to assign the 121.0 and 123.0 ppm resonances to C5 and C3, respectively. For the enzyme-bound equilibrium complex formed from holoenzyme and [4-13C]ALA, two peaks of equal area with chemical shifts of 121.5 and 127.2 ppm are observed (line widths approximately 50 Hz), indicating that the predominant species is probably a distorted form of PBG. When excess free PBG is present, it is in slow exchange with bound PBG, indicating an exchange rate of less than 10 s-1, which is consistent with the turnover rate of the enzyme. For the complex formed from [4-13C]ALA and methyl methanethiosulfonate (MMTS) modified PBG synthase, which does not catalyze PBG formation, the predominant species is a Schiff base adduct (chemical shift = 166.5 ppm, line width approximately 50 Hz). Free ALA is in slow exchange with the Schiff base. Activation of the MMTS-modified enzyme-Schiff base complex with 113Cd and 2-mercaptoethanol results in the loss of the Schiff base signal and the appearance of bound PBG with the same chemical shifts as for the bound equilibrium complex with Zn(II) enzyme. Neither splitting nor broadening from 113Cd-13C coupling was observed.

摘要

相似文献

1
13C NMR studies of porphobilinogen synthase: observation of intermediates bound to a 280,000-dalton protein.
Biochemistry. 1987 Jul 14;26(14):4258-64. doi: 10.1021/bi00388a012.
2
13C NMR studies of methylene and methine carbons of substrate bound to a 280,000-dalton protein, porphobilinogen synthase.与28万道尔顿蛋白质——胆色素原合酶结合的底物中亚甲基和次甲基碳的13C核磁共振研究。
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15N and 13C NMR studies of ligands bound to the 280,000-dalton protein porphobilinogen synthase elucidate the structures of enzyme-bound product and a Schiff base intermediate.对与28万道尔顿的胆色素原合酶结合的配体进行的¹⁵N和¹³C核磁共振研究阐明了酶结合产物和席夫碱中间体的结构。
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Dissection of the early steps in the porphobilinogen synthase catalyzed reaction. Requirements for Schiff's base formation.
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5-Chloro[1,4-13C]levulinic acid modification of mammalian and bacterial porphobilinogen synthase suggests an active site containing two Zn(II).5-氯[1,4-¹³C]乙酰丙酸对哺乳动物和细菌胆色素原合酶的修饰表明其活性位点含有两个锌(II)。
Biochemistry. 1994 Sep 27;33(38):11554-62. doi: 10.1021/bi00204a018.
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5-Chlorolevulinate modification of porphobilinogen synthase identifies a potential role for the catalytic zinc.5-氯乙酰丙酸对胆色素原合酶的修饰揭示了催化锌的潜在作用。
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13C NMR spectroscopy of labeled pyridoxal 5'-phosphate. Model studies, D-serine dehydratase, and L-glutamate decarboxylase.标记的磷酸吡哆醛的13C核磁共振光谱。模型研究、D-丝氨酸脱水酶和L-谷氨酸脱羧酶。
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Magnetic resonance studies on the active site and metal centers of Bradyrhizobium japonicum porphobilinogen synthase.慢生根瘤菌卟胆原合酶活性位点和金属中心的磁共振研究。
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Porphobilinogen synthase modification with methylmethanethiosulfonate. A protocol for the investigation of metalloproteins.用甲硫基甲烷磺酸酯修饰胆色素原合酶。一种研究金属蛋白的方法。
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Porphobilinogen synthase from Escherichia coli is a Zn(II) metalloenzyme stimulated by Mg(II).来自大肠杆菌的胆色素原合酶是一种受Mg(II)刺激的Zn(II)金属酶。
Arch Biochem Biophys. 1993 Jan;300(1):169-77. doi: 10.1006/abbi.1993.1024.

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