Liyanapathiranage Prabha, Avin Farhat A, Oksel Cansu, Swiggart Ethan, Gao Ying, Baysal-Gurel Fulya
Tennessee State University, 5717, Otis Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, Tennessee, United States, 37110;
Tennessee State University, Otis L. Floyd Nursery Research Center, 472 Cadillac Lane, McMinnville, Tennessee, United States, 97330;
Plant Dis. 2023 Jan 12. doi: 10.1094/PDIS-11-22-2563-PDN.
American ginseng ( L.) is one of the most valuable medicinal plants that is native to the U.S. This plant is naturally grown under hardwood canopies or artificially cultivated in fields covered with shade. Bacterial infections were observed on 5-year-old cultivated American ginseng roots in Rutherford Co., TN, in March 2022. Infected roots were exhibiting brown lesions in varying sizes. Under severe infection, the periderm of the root was ruptured, leaving a scabbed appearance on the root. The disease severity (percentage root area diseased) was nearly 20% and the disease incidence was nearly 10% out of 20 plants. Bacterial streaming from the infected tissue was observed under the microscope. Bacteria were isolated from surface-sterilized infected root tissue (0.525% NaOCl; 1 min) by plating 10-fold serial dilutions onto yeast dextrose carbonate and King's B (KB) media. Gram-negative, fluorescent bacterial colonies of the isolates FBG1141A and FBG1141B were milky white and translucent on KB at 28 °C. The biochemical and physiological tests including oxidase, levan, arginine dihydrolase, catalase, esculin, mobility test, and growth at 35°C were positive but gelatine and starch hydrolasis were negative. Bacterial suspension prepared with sterile distilled water (1×10 CFU/ml) resulted in soft rot on potato slices. The BIOLOG test showed positive results for the utilization of D-gluconic acid, D-glucuronic acid, D-galactose, D-glucose, L-serine and citric acid but negative results for the utilization of cellobiose and L-rhamnose. Bacterial identity was further confirmed by extracting the total genomic DNA using DNeasy PowerLyzer Microbial Kit directly from the two pure cultures. The small subunit ribosomal RNA (16S rRNA) and RNA polymerase sigma factor (D) genes were amplified and sequenced by the primers 8F/1492R (Galkiewicz et al. 2008) and PsEG30F/PsEG790R (Mulet et al. 2009), respectively. The sequences (GenBank accession nos. OP549779, OP550133: 16S; OP554814, OP554815: D) were 99.26% similar to 16S rRNA and 100% to D genes of (LC507983: 16S and MH49410: D) from several hosts in multiple countries in the NCBI database. A phylogenetic analysis was performed by adding the concatenated sequences of 16S and D from other closely related taxa obtained from GenBank (Fig. 1). Pathogenicity test was performed by spraying a suspension of the FBG1141A strain (10 CFU/ml) on six 2-year-old American ginseng roots wounded with a sterilized needle. Plants were covered with clear plastic for 24 h and maintained inside a greenhouse at 21 to 23°C, 70% RH, 16-h photoperiod. Six wounded roots were sprayed with sterilized water as controls and kept in the same condition. Inoculated roots showed rusty root symptoms after 4 weeks (Fig. 2a), while controls remained asymptomatic (Fig. 2b). The bacterium was re-isolated from the infected tissue and confirmed as using physiological and biochemical tests as well as sequencing. has been previously reported causing rusty-colored roots on Korean Ginseng ( C.A. Mey)(Choi et al. 2005; Farh et al. 2018; Lee et al. 2011) but to our knowledge, this is the first report of rusty root caused by on American ginseng () in Tennessee and the U.S. Identification of bacterial pathogen impacting the economic yield of American ginseng can be effective for developing correct disease management strategies.
西洋参(Panax quinquefolius L.)是原产于美国的最有价值的药用植物之一。这种植物自然生长在阔叶林冠层下,或在有遮荫的田地里人工栽培。2022年3月,在田纳西州卢瑟福县5年生人工栽培的西洋参根上观察到细菌感染。受感染的根出现了大小不一的褐色病斑。在严重感染的情况下,根的周皮破裂,根部表面出现结痂外观。在20株植物中,病害严重程度(病斑占根面积的百分比)接近20%,发病率接近10%。在显微镜下观察到从受感染组织中有细菌溢出现象。通过将10倍系列稀释液接种到酵母葡萄糖碳酸盐培养基和King's B(KB)培养基上,从表面消毒的受感染根组织(0.525%次氯酸钠;1分钟)中分离细菌。分离株FBG1141A和FBG1141B的革兰氏阴性、荧光细菌菌落在28°C的KB培养基上呈乳白色且半透明。包括氧化酶、果聚糖、精氨酸双水解酶、过氧化氢酶、七叶苷、运动性测试以及在35°C下生长的生化和生理测试均为阳性,但明胶和淀粉水解测试为阴性。用无菌蒸馏水制备的细菌悬液(1×10⁸ CFU/ml)导致土豆片软腐。BIOLOG测试显示利用D - 葡萄糖酸、D - 葡萄糖醛酸、D - 半乳糖、D - 葡萄糖、L - 丝氨酸和柠檬酸的结果为阳性,但利用纤维二糖和L - 鼠李糖的结果为阴性。通过使用DNeasy PowerLyzer Microbial Kit直接从两种纯培养物中提取总基因组DNA,进一步确认了细菌的身份。小亚基核糖体RNA(16S rRNA)和RNA聚合酶西格玛因子(rpoD)基因分别用引物8F/1492R(Galkiewicz等人,2008年)和PsEG30F/PsEG790R(Mulet等人,2009年)进行扩增和测序。这些序列(GenBank登录号:OP549779、OP550133:16S;OP554814、OP554815:rpoD)与NCBI数据库中来自多个国家几种宿主的Pantoea agglomerans(LC507983:16S和MH49410:rpoD)的16S rRNA相似性为99.26%,与rpoD基因相似性为100%。通过添加从GenBank获得的其他密切相关分类群的16S和rpoD串联序列进行了系统发育分析(图1)。通过将FBG1141A菌株的悬液(10⁸ CFU/ml)喷洒在六株用消毒针划伤的2年生西洋参根上进行致病性测试。用透明塑料覆盖植株24小时,并保持在温室中温度为21至23°C、相对湿度70%、光周期为16小时的条件下。六株受伤的根用消毒水喷洒作为对照,并保持在相同条件下。接种4周后,接种的根出现锈根症状(图2a),而对照仍无症状(图2b)。从受感染组织中重新分离出细菌,并通过生理生化测试以及测序确认为Pantoea agglomerans。先前已有报道Pantoea agglomerans在高丽参(Panax ginseng C.A. Mey)上引起锈色根(Choi等人,200