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Rapid Bacterial Identification and Drug Sensitivity Test Methods for Pathogens in Positive Blood Cultures.血培养阳性标本中病原菌的快速细菌鉴定及药敏试验方法。
Clin Lab. 2022 Oct 1;68(10). doi: 10.7754/Clin.Lab.2022.211247.
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Microbiological Laboratory Diagnosis of Human Brucellosis: An Overview.人类布鲁氏菌病的微生物学实验室诊断:概述
Pathogens. 2021 Dec 14;10(12):1623. doi: 10.3390/pathogens10121623.
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Challenges in the application of NGS in the clinical laboratory.二代测序技术在临床实验室应用中的挑战。
Hum Immunol. 2021 Nov;82(11):812-819. doi: 10.1016/j.humimm.2021.03.011. Epub 2021 Apr 21.
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How to manage treatment failure in prosthetic joint infection.如何处理人工关节感染治疗失败的问题。
Clin Microbiol Infect. 2020 Nov;26(11):1473-1480. doi: 10.1016/j.cmi.2020.06.022. Epub 2020 Jun 30.
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Culture-negative periprosthetic joint infections.培养阴性的人工关节周围感染
EFORT Open Rev. 2019 Oct 7;4(10):585-594. doi: 10.1302/2058-5241.4.180067. eCollection 2019 Oct.
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Invasive Aspergillosis by : Epidemiology, Diagnosis, Antifungal Resistance, and Management.《侵袭性曲霉病:流行病学、诊断、抗真菌耐药性及治疗》
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Clinical Metagenomic Next-Generation Sequencing for Pathogen Detection.临床宏基因组下一代测序在病原体检测中的应用。
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Chronic Meningitis Investigated via Metagenomic Next-Generation Sequencing.采用宏基因组下一代测序技术对慢性脑膜炎进行研究。
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下一代测序技术在关节置换术后假体周围关节感染病原菌检测中的应用。

Application of next-generation sequencing technology in the detection of pathogenic bacteria of the periprosthetic joint infection after arthroplasty.

机构信息

Department of Clinical Pharmacy, Honghui Hospital, Xi'an Jiaotong University, Xi'an, People's Republic of China.

出版信息

Int Wound J. 2023 Aug;20(6):2121-2128. doi: 10.1111/iwj.14087. Epub 2023 Jan 17.

DOI:10.1111/iwj.14087
PMID:36647902
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10333033/
Abstract

To investigate the application value of next-generation sequencing (NGS) technology in the detection of pathogenic bacteria in the periprosthetic joint infection after arthroplasty. Twenty-two cases of patients with joint infection after arthroplasty in our hospital from March 2020 to March 2021 were selected, with 11 cases of knee and 11 cases of hip, including 8 cases of male and 14 cases of female, and an average age of 63.55 ± 13.11 years old (range from 28 to 85). Microbiological culture results of synovial fluid and periprosthetic joint tissue and NGS results of periprosthetic joint tissue were collected. The detection rate of NGS and microbiological culture were calculated and statistically analysed by paired χ test. Among the 22 patients with joint infection after arthroplasty, the positive rate of NGS was 90.91% (20/22), whereas the positive rate of bacterial culture was 50.00% (11/22). Paired chi-square test showed a statistically significant difference in the detection rate between the two groups (P = .0029). In the detection of pathogenic microorganism, NGS detected 12 kinds of bacteria, Staphylococcus aureus in 3 patients, Staphylococcus epidermidis in 5 cases, Streptococcus 1 case, Streptococcus dysgalactiae 1 case, Xanthomonas campestris 3 cases, Escherichia coli 2 cases, Bacillus cereus 2 cases, Klebsiella pneumoniae 1 case, Finegoldia magna 1 case, Corynebacterium klopensteriella in 1 case, Brucella 1 case, and Aspergillus flavus 1 case. Bacterial culture detected 6 kinds of bacteria, included 5 cases of Staphylococcus epidermis (including 3 cases of Methicillin-resistant coagulase-negative Staphylococcus, (MRSCoN)), 2 cases of Staphylococcus aureus (both Methicillin-resistant Staphylococcus aureus, (MRSA)), 1 case of Klebsiella pneumoniae, 1 case of Staphylococcus hominis (MRSCoN), 1 case of G bacillus, and 1 case of Brucella. Compared with bacterial culture, NGS technology has some advantages in the detection efficiency, detection rate, and comprehensiveness, which might be greater diagnostic value in the joint fluid of infection after arthroplasty.

摘要

探讨下一代测序(NGS)技术在检测关节置换术后假体周围关节感染中的应用价值。选取我院 2020 年 3 月至 2021 年 3 月收治的 22 例关节置换术后关节感染患者,其中膝关节 11 例,髋关节 11 例,男 8 例,女 14 例,年龄 63.55±13.11 岁(28~85 岁)。收集关节液和假体周围组织的微生物培养结果和假体周围组织的 NGS 结果,采用配对 χ检验计算 NGS 和微生物培养的检出率,并进行统计学分析。22 例关节置换术后关节感染患者中,NGS 阳性率为 90.91%(20/22),细菌培养阳性率为 50.00%(11/22)。配对 χ检验显示两组检出率差异有统计学意义(P=0.0029)。在检测病原体微生物方面,NGS 检测到 12 种细菌,3 例金黄色葡萄球菌,5 例表皮葡萄球菌,1 例链球菌,1 例停乳链球菌,3 例野油菜黄单胞菌,2 例大肠埃希菌,2 例蜡样芽孢杆菌,1 例肺炎克雷伯菌,1 例金葡菌,1 例棒状杆菌,1 例布鲁菌,1 例黄曲霉菌。细菌培养检测到 6 种细菌,包括 5 例表皮葡萄球菌(3 例耐甲氧西林凝固酶阴性葡萄球菌(MRSCoN)),2 例金黄色葡萄球菌(均为耐甲氧西林金黄色葡萄球菌(MRSA)),1 例肺炎克雷伯菌,1 例人葡萄球菌(MRSCoN),1 例 G 杆菌,1 例布鲁菌。与细菌培养相比,NGS 技术在检测效率、检出率和全面性方面具有一定优势,可能对关节置换术后关节液感染具有更大的诊断价值。