Biodiversity Division, National Institute for Environmental Studies, Tsukuba, Ibaraki, 305-8506, Japan.
Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo-ku, Tokyo, 113-0033, Japan.
BMC Microbiol. 2023 Jan 18;23(1):16. doi: 10.1186/s12866-023-02767-3.
Astrephomene is an interesting green algal genus that, together with Volvox, shows convergent evolution of spheroidal multicellular bodies with somatic cells of the colonial or multicellular volvocine lineage. A recent whole-genome analysis of A. gubernaculifera resolved the molecular-genetic basis of such convergent evolution, and two species of Astrephomene were described. However, maintenance of culture strains of Astrephomene requires rapid inoculation of living cultures, and cryopreserved culture strains have not been established in public culture collections.
To establish cryopreserved culture strains of two species of Astrephomene, conditions for cryopreservation of the two species were investigated using immature and mature vegetative colonies and two cryoprotectants: N,N-dimethylformamide (DMF) and hydroxyacetone (HA). Rates of cell survival of the A. gubernaculifera or A. perforata strain after two-step cooling and freezing in liquid nitrogen were compared between different concentrations (3 and 6%) of DMF and HA and two types of colonies: immature colonies (small colonies newly released from the parent) and mature colonies (large colonies just before daughter colony formation). The highest rate of survival [11 ± 13% (0.36-33%) by the most probable number (MPN) method] of A. gubernaculifera strain NIES-4017 (established in 2014) was obtained when culture samples of immature colonies were subjected to cryogenic treatment with 6% DMF. In contrast, culture samples of mature colonies subjected to 3% HA cryogenic treatment showed the highest "MPN survival" [5.5 ± 5.9% (0.12-12%)] in A. perforata. Using the optimized cryopreservation conditions for each species, survival after freezing in liquid nitrogen was examined for six other strains of A. gubernaculifera (established from 1962 to 1981) and another A. perforata strain maintained in the Microbial Culture Collection at the National Institute for Environmental Studies (MCC-NIES). We obtained ≥0.1% MPN survival of the A. perforata strain. However, only two of the six strains of A. gubernaculifera showed ≥0.1% MPN survival. By using the optimal cryopreserved conditions obtained for each species, five cryopreserved strains of two species of Astrephomene were established and deposited in the MCC-NIES.
The optimal cryopreservation conditions differed between the two species of Astrephomene. Cryopreservation of long-term-maintained strains of A. gubernaculifera may be difficult; further studies of cryopreservation of these strains are needed.
Astrephomene 是一种有趣的绿藻属,与 Volvox 一起表现出具有体细胞的球形多细胞体的趋同进化,而体细胞具有殖民地或多细胞的 Volvocine 血统。最近对 A. gubernaculifera 的全基因组分析解决了这种趋同进化的分子遗传基础,并描述了两种 Astrephomene 物种。然而,Astrephomene 培养物的保存需要快速接种活培养物,并且冷冻保存的培养物在公共培养物中尚未建立。
为了建立两种 Astrephomene 物种的冷冻保存培养物,使用不成熟和成熟的营养体殖民地以及两种冷冻保护剂(N,N-二甲基甲酰胺(DMF)和羟基丙酮(HA))研究了两种物种的冷冻保存条件。在液氮中进行两步冷却和冷冻时,A. gubernaculifera 或 A. perforata 菌株的细胞存活率与不同浓度(3%和 6%)的 DMF 和 HA 以及两种类型的殖民地之间进行了比较:不成熟的殖民地(刚从母体释放的小殖民地)和成熟的殖民地(即将形成子菌落之前的大殖民地)。NIES-4017(2014 年建立)菌株的存活率最高[11±13%(0.36-33%),通过最可能数(MPN)法],当用 6%DMF 对不成熟的培养物样本进行低温处理时。相比之下,在 3%HA 低温处理下,成熟的培养物样本显示出 A. perforata 中最高的“MPN 存活率”[5.5±5.9%(0.12-12%)]。使用每种物种的最佳冷冻保存条件,对来自 1962 年至 1981 年的其他六种 A. gubernaculifera 菌株和在国家环境研究所微生物培养物收集中心(MCC-NIES)中保存的另一种 A. perforata 菌株进行了冷冻后存活能力的检查。我们获得了 A. perforata 菌株的≥0.1%MPN 存活率。但是,只有六种 A. gubernaculifera 菌株中的两种显示了≥0.1%的 MPN 存活率。通过使用为每种物种获得的最佳冷冻保存条件,建立并在 MCC-NIES 中保存了两种 Astrephomene 物种的五个冷冻保存菌株。
两种 Astrephomene 物种的最佳冷冻保存条件不同。A. gubernaculifera 长期保存菌株的冷冻保存可能很困难;需要进一步研究这些菌株的冷冻保存。