Liu Mu, Lu Jinsen, Li Baoyong, Zhang Lvshui
College of Landscape Architecture and Arts, Jiangxi Agricultural University, Nanchang, China.
Mitochondrial DNA B Resour. 2023 Jan 15;8(1):116-118. doi: 10.1080/23802359.2022.2057246. eCollection 2023.
Fisch. ex Hornem. is an important Chinese medicine. Here, the complete chloroplast genome of was assembled and characterized. The length of the chloroplast genome was 146,679 bp with the typical quadripartite structure, containing two inverted repeats (IRs) of 24,595 bp separated by a large single-copy (LSC) region of 79,820 bp and a small single-copy (SSC) region of 17,669 bp. The whole chloroplast genome of contains 111 genes, including 77 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. Nucleotide variability analysis identified three hotspot regions (, , and ) for genomic divergence and 52 simple sequence repeats. Phylogenetic analysis based on the complete chloroplast genomes exhibited that formed a clade with and .
Fisch. ex Hornem.是一种重要的中药材。在此，组装并表征了其完整的叶绿体基因组。叶绿体基因组长度为146,679 bp，具有典型的四分体结构，包含两个24,595 bp的反向重复序列（IRs），由一个79,820 bp的大单拷贝（LSC）区域和一个17,669 bp的小单拷贝（SSC）区域隔开。其完整的叶绿体基因组包含111个基因，包括77个蛋白质编码基因、30个tRNA基因和4个rRNA基因。核苷酸变异性分析确定了三个基因组差异的热点区域（、和）以及52个简单序列重复。基于完整叶绿体基因组的系统发育分析表明，与和形成了一个分支。
