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A metabolism-related gene signature for predicting the prognosis in thyroid carcinoma.

作者信息

Du Qiujing, Zhou Ruhao, Wang Heng, Li Qian, Yan Qi, Dang Wenjiao, Guo Jianjin

机构信息

Department of General Medicine, Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Taiyuan, China.

Department of Orthopedics, Shanxi Key Laboratory of Bone and Soft Tissue Injury Repair, Second Clinical Medical College, Shanxi Medical University, Taiyuan, China.

出版信息

Front Genet. 2023 Jan 4;13:972950. doi: 10.3389/fgene.2022.972950. eCollection 2022.


DOI:10.3389/fgene.2022.972950
PMID:36685893
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9846547/
Abstract

Metabolic reprogramming is one of the cancer hallmarks, important for the survival of malignant cells. We investigated the prognostic value of genes associated with metabolism in thyroid carcinoma (THCA). A prognostic risk model of metabolism-related genes (MRGs) was built and tested based on datasets in The Cancer Genome Atlas (TCGA), with univariate Cox regression analysis, LASSO, and multivariate Cox regression analysis. We used Kaplan-Meier (KM) curves, time-dependent receiver operating characteristic curves (ROC), a nomogram, concordance index (C-index) and restricted mean survival (RMS) to assess the performance of the risk model, indicating the splendid predictive performance. We established a three-gene risk model related to metabolism, consisting of , , and . The correlation analysis in patients with different risk statuses involved immune infiltration, mutation and therapeutic reaction. We also performed pan-cancer analyses of model genes to predict the mutational value in various cancers. Our metabolism-related risk model had a powerful predictive capability in the prognosis of THCA. This research will provide the fundamental data for further development of prognostic markers and individualized therapy in THCA.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/e2e46e2e85e3/fgene-13-972950-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/11966aefb4e8/fgene-13-972950-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/93957146ed51/fgene-13-972950-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/81eb722aa668/fgene-13-972950-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/5bd9c0bea765/fgene-13-972950-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/8ac8ced51169/fgene-13-972950-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/882c735234a3/fgene-13-972950-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/ce778827f5c2/fgene-13-972950-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/25a3a5a6aa6d/fgene-13-972950-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/9ca35dadb053/fgene-13-972950-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/bbd5c7af53df/fgene-13-972950-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/a2d894af5101/fgene-13-972950-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/e2e46e2e85e3/fgene-13-972950-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/11966aefb4e8/fgene-13-972950-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/93957146ed51/fgene-13-972950-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/81eb722aa668/fgene-13-972950-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/5bd9c0bea765/fgene-13-972950-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/8ac8ced51169/fgene-13-972950-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/882c735234a3/fgene-13-972950-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/ce778827f5c2/fgene-13-972950-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/25a3a5a6aa6d/fgene-13-972950-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/9ca35dadb053/fgene-13-972950-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/bbd5c7af53df/fgene-13-972950-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/a2d894af5101/fgene-13-972950-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f53c/9846547/e2e46e2e85e3/fgene-13-972950-g012.jpg

相似文献

[1]
A metabolism-related gene signature for predicting the prognosis in thyroid carcinoma.

Front Genet. 2023-1-4

[2]
Identification of a Five-Gene Signature and Establishment of a Prognostic Nomogram to Predict Progression-Free Interval of Papillary Thyroid Carcinoma.

Front Endocrinol (Lausanne). 2019-11-15

[3]
Identification of ferroptosis genes in immune infiltration and prognosis in thyroid papillary carcinoma using network analysis.

BMC Genomics. 2021-7-27

[4]
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Cancer Cell Int. 2022-9-29

[5]
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Front Endocrinol (Lausanne). 2022

[6]
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Front Genet. 2022-8-24

[7]
Construction and validation of a metabolic-related genes prognostic model for oral squamous cell carcinoma based on bioinformatics.

BMC Med Genomics. 2022-12-24

[8]
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Math Biosci Eng. 2021-9-15

[9]
Identification of a metabolic reprogramming-related signature associated with prognosis and immune microenvironment of head and neck squamous cell carcinoma by in silico analysis.

Cancer Med. 2022-8

[10]
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Curr Med Sci. 2021-10

引用本文的文献

[1]
Hypoxia-Induced Suppression of FAM99A and FAM99B Contributes to the Development and Glucose Metabolic Reprogramming of Hepatocellular Carcinoma.

FASEB J. 2025-7-31

本文引用的文献

[1]
Structural basis for the substrate recognition mechanism of ATP-sulfurylase domain of human PAPS synthase 2.

Biochem Biophys Res Commun. 2022-1-1

[2]
Investigation of Prognostic Markers of Lung Adenocarcinoma Based on Tumor Metabolism-Related Genes.

Front Genet. 2021-10-19

[3]
Identification of lipid metabolism-related genes as prognostic indicators in papillary thyroid cancer.

Acta Biochim Biophys Sin (Shanghai). 2021-12-8

[4]
Construction of a prognostic signature in Ewing's sarcoma: Based on metabolism-related genes.

Transl Oncol. 2021-12

[5]
A 13-Gene Metabolic Prognostic Signature Is Associated With Clinical and Immune Features in Stomach Adenocarcinoma.

Front Oncol. 2021-6-21

[6]
Intestinal Sulfation Is Essential to Protect Against Colitis and Colonic Carcinogenesis.

Gastroenterology. 2021-7

[7]
Identification of a Six Gene Prognosis Signature for Papillary Thyroid Cancer Using Multi-Omics Methods and Bioinformatics Analysis.

Front Oncol. 2021-3-18

[8]
Integrated analysis of RNA-binding proteins in thyroid cancer.

PLoS One. 2021

[9]
Relationship of ITPKA expression with the prognosis of breast cancer.

Mol Genet Genomic Med. 2021-4

[10]
Metabolic Codependencies in the Tumor Microenvironment.

Cancer Discov. 2021-5

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