Suppr超能文献

2015-2016 年厄尔尼诺现象后,墨西哥加勒比海地区白化和未白化水螅体的转录组差异。

Transcriptomic differences between bleached and unbleached hydrozoan following the 2015-2016 ENSO in the Mexican Caribbean.

机构信息

Posgrado en Ciencias Químico Biológicas, Facultad de Química, Universidad Autónoma de Querétaro, Querétaro, México.

European Bioinformatics Institute, EBI-Hinxton, Cambridge, United Kingdom.

出版信息

PeerJ. 2023 Jan 18;11:e14626. doi: 10.7717/peerj.14626. eCollection 2023.

Abstract

The 2015-2016 El Niño-southern oscillation or "ENSO" caused many colonies that live in the Mexican Caribbean to experience extensive bleaching. The purpose of this work was to analyze the effect of bleaching on the cellular response of , employing a transcriptomic approach with RNA-seq. As expected, bleached specimens contained a significantly lower chlorophyll content than unbleached hydrocorals. The presence of algae of the genera and was only found in tissues of unbleached , which could be associated to the greater resistance that these colonies exhibited during bleaching. We found that 299 genes were differentially expressed in bleached colonies following the 2015-2016 ENSO in the Mexican Caribbean. The differential expression analysis of bleached specimens evidenced enriched terms for functional categories, such as ribosome, RNA polymerase and basal transcription factors, chaperone, oxidoreductase, among others. Our results suggest that the heat-shock response mechanisms displayed by include: an up-regulation of endogenous antioxidant defenses; a higher expression of heat stress response genes; up-regulation of transcription-related genes, higher expression of genes associated to transport processes, inter alia. This study constitutes the first differential gene expression analysi of the molecular response of a reef-forming hydrozoan during bleaching.

摘要

2015-2016 年厄尔尼诺-南方涛动(ENSO)导致生活在墨西哥加勒比海的许多珊瑚虫经历了广泛的白化现象。本研究旨在通过转录组学方法(RNA-seq)分析白化现象对 的细胞反应的影响。正如预期的那样,白化标本的叶绿素含量明显低于未白化的水螅体。只有未白化的水螅体组织中才发现有 和 的藻类,这可能与这些珊瑚虫在白化过程中表现出的更高的抗性有关。我们发现,在 2015-2016 年 ENSO 之后,加勒比海的墨西哥白化 中 299 个基因的表达存在差异。白化 标本的差异表达分析表明,核糖体、RNA 聚合酶和基础转录因子、伴侣蛋白、氧化还原酶等功能类别相关的术语富集。我们的结果表明, 所表现出的热休克反应机制包括:内源性抗氧化防御的上调;热应激反应基因的更高表达;与转录相关的基因上调,与运输过程相关的基因表达增加等。本研究首次对造礁水螅在白化过程中的分子反应进行了差异基因表达分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22f0/9864129/0e17afbf156b/peerj-11-14626-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验