Ruth L. and David S. Gottesman Institute for Stem Cell and Regenerative Medicine Research, Albert Einstein College of Medicine, Bronx, NY-10461, USA.
Department of Cell Biology, Albert Einstein College of Medicine, Bronx, NY- 10461, USA.
Mini Rev Med Chem. 2023;23(15):1507-1513. doi: 10.2174/1389557523666230125114921.
Discoidin domain receptor (DDR) 1, a collagen binding receptor kinase, is an intensively researched therapeutic target for cancer, fibrosis and other diseases. The majority of early known DDR1 inhibitors targeted the ATP binding pocket of this enzyme that shares structural similarities with other kinase pockets across the biological system. This structural similarity of DDR1 kinase with other protein kinases often leads to "off target "toxicity issues. Understanding of uniqueness in DDR:ATP-phosphate-binding loop (P-loop), DNA encoded library screen, structure-guided optimization studies, and machine learning drug design platforms that come under the umbrella of artificial intelligence has led to the discovery of a new array of inhibitors that are highly selective for DDR1 over DDR2 and other similar kinases. Most of the drug discovery platforms concentrated on the ATP binding region of DDR1 kinase and never looked beyond this region for novel therapeutic options. Recent findings have disclosed the kinase-independent functions of DDR1 in immune exclusion, which resides in the extracellular collagen-binding domain, thus opening avenues for the development of inhibitors that veer away from targeting ATP binding pockets. This recent understanding of the functional modalities of DDR1 opens the complexity of targeting this transmembrane protein as per its functional prominence in the respective disease and thus demands the development of specific novel therapeutics. The perspective gives a short overview of recent developments of DDR1 inhibitors with the aid of the latest technologies, future directions for therapeutic development, and possibility of combinational therapeutic treatments to completely disengage functions of DDR1.
Discoidin domain receptor (DDR) 1 是一种胶原结合受体激酶,是癌症、纤维化和其他疾病的热门治疗靶点。大多数早期已知的 DDR1 抑制剂针对的是该酶的 ATP 结合口袋,该口袋与整个生物系统中的其他激酶口袋具有结构相似性。DDR1 激酶与其他蛋白激酶的这种结构相似性常常导致“脱靶”毒性问题。对 DDR 的独特性的理解:ATP-磷酸结合环(P 环)、DNA 编码文库筛选、基于结构的优化研究以及人工智能领域下的机器学习药物设计平台,导致了一系列新型抑制剂的发现,这些抑制剂对 DDR1 具有高度选择性,而对 DDR2 和其他类似激酶的选择性较低。大多数药物发现平台都集中在 DDR1 激酶的 ATP 结合区域,从未在该区域之外寻找新的治疗选择。最近的发现揭示了 DDR1 的激酶非依赖性功能在免疫排斥中的作用,该功能位于细胞外胶原结合域,从而为开发避开靶向 ATP 结合口袋的抑制剂开辟了道路。最近对 DDR1 功能模式的理解,根据其在相应疾病中的功能重要性,增加了靶向这种跨膜蛋白的复杂性,因此需要开发特定的新型治疗药物。本综述简要概述了最近利用最新技术开发 DDR1 抑制剂的进展、治疗开发的未来方向以及联合治疗的可能性,以完全阻断 DDR1 的功能。