Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
PLoS Biol. 2023 Jan 26;21(1):e3001966. doi: 10.1371/journal.pbio.3001966. eCollection 2023 Jan.
Viruses are the most abundant biological entity in the ocean and infect a wide range of microbial life across bacteria, archaea, and eukaryotes. In this essay, we take a journey across several orders of magnitude in the scales of biological organization, time, and space of host-virus interactions in the ocean, aiming to shed light on their ecological relevance. We start from viruses infecting microbial host cells by delivering their genetic material in seconds across nanometer-size membranes, which highjack their host's metabolism in a few minutes to hours, leading to a profound transcriptomic and metabolic rewiring. The outcome of lytic infection leads to a release of virions and signaling molecules that can reach neighboring cells a few millimeters away, resulting in a population whose heterogeneous infection level impacts the surrounding community for days. These population dynamics can leave unique metabolic and biogeochemical fingerprints across scales of kilometers and over several decades. One of the biggest challenges in marine microbiology is to assess the impact of viruses across these scales, from the single cell to the ecosystem level. Here, we argue that the advent of new methodologies and conceptual frameworks represents an exciting time to pursue these efforts and propose a set of important challenges for the field. A better understanding of host-virus interactions across scales will inform models of global ocean ecosystem function in different climate change scenarios.
病毒是海洋中最丰富的生物实体,感染着细菌、古菌和真核生物等多种微生物。在本文中,我们跨越了海洋中宿主-病毒相互作用的生物组织、时间和空间的多个数量级,旨在揭示它们的生态相关性。我们从病毒感染微生物宿主细胞开始,在几纳米大小的膜上几秒钟内传递其遗传物质,几分钟到几小时内劫持宿主的新陈代谢,导致转录组和代谢的深刻重编。裂解感染的结果导致病毒粒子和信号分子的释放,这些分子可以传播到几毫米外的邻近细胞,导致一个种群的异质感染水平在几天内影响周围的群落。这些种群动态可以在数公里和数十年的范围内留下独特的代谢和生物地球化学指纹。海洋微生物学的最大挑战之一是评估病毒在这些尺度上的影响,从单细胞到生态系统水平。在这里,我们认为新方法和概念框架的出现代表了一个令人兴奋的时刻,可以进行这些努力,并为该领域提出了一系列重要的挑战。更好地了解跨尺度的宿主-病毒相互作用将为不同气候变化情景下的全球海洋生态系统功能模型提供信息。