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一种基于可编程熵驱动动态 DNA 网络调控 DNA-金纳米粒子杂化水凝胶膜的便携式比色即时检测微 RNA 的平台。

A portable colorimetric point-of-care testing platform for MicroRNA detection based on programmable entropy-driven dynamic DNA network modulated DNA-gold nanoparticle hybrid hydrogel film.

机构信息

Research Center for Analytical Sciences, Tianjin Key Laboratory of Biosensing and Molecular Recognition, College of Chemistry, Nankai University, Tianjin, 300071, PR China.

Research Center for Analytical Sciences, Tianjin Key Laboratory of Biosensing and Molecular Recognition, College of Chemistry, Nankai University, Tianjin, 300071, PR China; Smart Sensing Interdisciplinary Science Center, School of Materials Science and Engineering, Nankai University, Tianjin, 300350, PR China.

出版信息

Biosens Bioelectron. 2023 Apr 1;225:115073. doi: 10.1016/j.bios.2023.115073. Epub 2023 Jan 9.

DOI:10.1016/j.bios.2023.115073
PMID:36701948
Abstract

Point-of-care testing (POCT) platforms for microRNA (miRNA) detection have attracted considerable attention in recent years, due to the increasingly important role of miRNA as biomarkers for the diagnosis of many diseases, such as cancers. However, several limitations such as the requirement of enzyme-related amplification system, expensive preservation cost, sophisticated analysis instruments and tedious operations of conventional miRNA biosensing devices severely hinder their widespread applications. In this work, a portable and smart colorimetric analysis platform was developed by employing the ultrathin DNA-gold nanoparticle (AuNP) hybrid hydrogel film as the signaling unit and the enzyme-free entropy-driven dynamic DNA network (EDN) as the signal converter and amplification unit. By programming the DNA sequences of the EDN, the EDN could respond to a specific miRNA, with miRNA-155 or miRNA-21 as the model target, and release a converter DNA with amplified concentration to further trigger the release of AuNPs from the hydrogel film as a colorimetric signal output. To avoid the use of sophisticated spectral instruments, digital analysis based on primary three-color channel (R/G/B) was further introduced by using user-friendly camera and image processing software, and a detection limit at pM level was achieved. Moreover, by introducing HO-mediated AuNPs enlargement procedure in the colorimetric analysis platform, the detection limit for miRNA target could further be enhanced to fM level. The POCT platform is also portable and storable with a good storage stability for at least 45 days, suggesting its great potential in practical diagnosis applications.

摘要

近年来,由于 microRNA(miRNA)作为许多疾病(如癌症)诊断的生物标志物的作用越来越重要,用于 miRNA 检测的即时检测(POCT)平台引起了广泛关注。然而,一些限制因素,如需要酶相关的扩增系统、昂贵的保存成本、复杂的分析仪器以及常规 miRNA 生物传感设备繁琐的操作,严重阻碍了它们的广泛应用。在这项工作中,通过采用超薄 DNA-金纳米粒子(AuNP)杂化水凝胶膜作为信号单元和无酶熵驱动动态 DNA 网络(EDN)作为信号转换器和扩增单元,开发了一种便携式智能比色分析平台。通过对 EDN 的 DNA 序列进行编程,EDN 可以响应特定的 miRNA,以 miRNA-155 或 miRNA-21 作为模型靶标,并释放具有放大浓度的转换器 DNA,进一步触发 AuNP 从水凝胶膜中释放作为比色信号输出。为了避免使用复杂的光谱仪器,进一步通过使用用户友好的相机和图像处理软件,引入了基于原始三色彩通道(R/G/B)的数字分析,实现了 pM 级别的检测限。此外,通过在比色分析平台中引入 HO 介导的 AuNP 放大过程,miRNA 靶标检测限可进一步增强至 fM 级。POCT 平台还具有便携性和可存储性,存储稳定性良好,至少可保存 45 天,这表明其在实际诊断应用中具有很大的潜力。

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