文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

A novel cuproptosis-related prognostic gene signature and validation of differential expression in hepatocellular carcinoma.

作者信息

Li Yaoting, Zeng Xuezhen

机构信息

Department of Forensic Science, Guangdong Police College, Guangzhou, Guangdong, China.

School of Biomedical Sciences, The Chinese University of Hong Kong, Hong Kong, Hong Kong SAR, China.

出版信息

Front Pharmacol. 2023 Jan 10;13:1081952. doi: 10.3389/fphar.2022.1081952. eCollection 2022.


DOI:10.3389/fphar.2022.1081952
PMID:36703728
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9871247/
Abstract

Cuproptosis is a newly discovered form of programmed cell death, which is characterized by accumulation of intra-cellular copper ion leading to the aggregation of lipoproteins and destabilization of Fe-S cluster proteins in mitochondrial metabolism, thereby affecting the prognosis of patients with cancer. However, the role of cuproptosis-related genes (CRGs) in hepatocellular carcinoma (HCC) remains elusive. Mutation signature, copy number variation and the expression of 10 CRGs were assessed in HCC from TCGA-LIHC dataset. ICGC-LIRI-JP dataset was used as further validation cohort. The least absolute shrinkage and selection operator (LASSO) was used to construct the prognostic model. Kaplan Meier curves, time-ROC curves, nomogram, univariate and multivariate Cox regression were utilized to evaluate the predictive efficacy of CRGs-score. Immune infiltration was analyzed by CIBERSOFT, ssGSEA algorithm, and TIMER database. The expression of prognostic CRGs was validated by qPCR both and . Drug sensitivity analysis was performed by pRRophetic. All of the CRGs were differentially expressed in HCC and 5 out of them (CDKN2A, DLAT, GLS, LIPT1, MTF1) correlated with patient survival. These signature genes were selected by LASSO analysis to establish a prognosis model to stratify HCC patients into high and low CRGs-score subgroups. High CRGs-score was associated with a worse prognosis. Subsequently, univariate and multivariate Cox regression verified that CRGs-score was an independent cancer risk factor that correlated with clinical factors including stage and grade. Nomogram integrating the CRGs-score and clinical risk factors performed well to predict patient survival. Immune infiltration analysis further revealed that the expression of immune checkpoint genes was significantly enhanced in high CRGs-score group, especially PD-1 and PD-L1. An independent validation cohort (ICGC) confirmed that CRGs-score as a stable and universally applicable indicator in predicting HCC patient survival. Concordantly, the expression of five confirmed signature genes were also differentially expressed in human HCC cell lines and mouse HCC model. In addition, we also analyzed the sensitivity of 10 clinical targeted therapies between high and low CRGs-score groups. This study elucidated the role of dysregulated CRGs in HCC cohort, with validation with and models. The CRGs-score might be applied as a novel prognostic factor in HCC.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/1c90e36a49ea/fphar-13-1081952-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/582de8ce0879/fphar-13-1081952-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/1569c24b1d8b/fphar-13-1081952-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/2f5d74cf4642/fphar-13-1081952-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/923c5f3aa1fd/fphar-13-1081952-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/84c975a3c80c/fphar-13-1081952-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/5cb2f97606b7/fphar-13-1081952-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/65fc68bb02b8/fphar-13-1081952-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/9b90bee16ca0/fphar-13-1081952-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/aa1d1ed3abb5/fphar-13-1081952-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/eb650a4fe878/fphar-13-1081952-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/9fe73f58f3f2/fphar-13-1081952-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/1c90e36a49ea/fphar-13-1081952-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/582de8ce0879/fphar-13-1081952-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/1569c24b1d8b/fphar-13-1081952-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/2f5d74cf4642/fphar-13-1081952-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/923c5f3aa1fd/fphar-13-1081952-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/84c975a3c80c/fphar-13-1081952-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/5cb2f97606b7/fphar-13-1081952-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/65fc68bb02b8/fphar-13-1081952-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/9b90bee16ca0/fphar-13-1081952-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/aa1d1ed3abb5/fphar-13-1081952-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/eb650a4fe878/fphar-13-1081952-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/9fe73f58f3f2/fphar-13-1081952-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabb/9871247/1c90e36a49ea/fphar-13-1081952-g012.jpg

相似文献

[1]
A novel cuproptosis-related prognostic gene signature and validation of differential expression in hepatocellular carcinoma.

Front Pharmacol. 2023-1-10

[2]
Cuproptosis-Related Signature Predicts the Prognosis, Tumor Microenvironment, and Drug Sensitivity of Hepatocellular Carcinoma.

J Immunol Res. 2022

[3]
Prognostic and Immunological Significance of the Molecular Subtypes and Risk Signatures Based on Cuproptosis in Hepatocellular Carcinoma.

Mediators Inflamm. 2023

[4]
An integrative analysis revealing cuproptosis-related lncRNAs signature as a novel prognostic biomarker in hepatocellular carcinoma.

Front Genet. 2023-2-10

[5]
Identification of cuproptosis-related subtypes, construction of a prognosis model, and tumor microenvironment landscape in gastric cancer.

Front Immunol. 2022

[6]
Comprehensive analysis of cuproptosis-related prognostic gene signature and tumor immune microenvironment in HCC.

Front Genet. 2023-2-20

[7]
Cuproptosis-related molecular classification and gene signature of hepatocellular carcinoma and experimental verification.

Transl Cancer Res. 2024-3-31

[8]
Identification of Pyroptosis Gene Signature Related Molecular Pattern, Clinical Implication, and Tumor Immunity in Hepatocellular Carcinoma`.

Comb Chem High Throughput Screen. 2023

[9]
Ferroptosis and cuproptosis prognostic signature for prediction of prognosis, immunotherapy and drug sensitivity in hepatocellular carcinoma: development and validation based on TCGA and ICGC databases.

Transl Cancer Res. 2023-1-30

[10]
A Novel Cuproptosis-Related Signature Identified DLAT as a Prognostic Biomarker for Hepatocellular Carcinoma Patients.

World J Oncol. 2022-10

引用本文的文献

[1]
Role and mechanisms of cuproptosis in the pathogenesis of Wilson's disease (Review).

Int J Mol Med. 2025-8

[2]
Unveiling the Cuproptosis in Colitis and Colitis-Related Carcinogenesis: A Multifaceted Player and Immune Moderator.

Research (Wash D C). 2025-5-14

[3]
Comprehensive analysis of prognosis and tumor immune microenvironment of cuproptosis-related gene CDKN2A in lung adenocarcinoma.

BMC Pulm Med. 2025-4-14

[4]
Cuproplasia and cuproptosis in hepatocellular carcinoma: mechanisms, relationship and potential role in tumor microenvironment and treatment.

Cancer Cell Int. 2025-4-9

[5]
Development of a MVI associated HCC prognostic model through single cell transcriptomic analysis and 101 machine learning algorithms.

Sci Rep. 2025-3-7

[6]
Pathomics signatures and cuproptosis-related genes signatures for prediction of prognosis in patients with hepatocellular carcinoma.

Transl Cancer Res. 2024-10-31

[7]
Identification of Cuproptosis-Associated Prognostic Gene Expression Signatures from 20 Tumor Types.

Biology (Basel). 2024-10-3

[8]
Cuproptosis, the novel type of oxidation-induced cell death in thoracic cancers: can it enhance the success of immunotherapy?

Cell Commun Signal. 2024-7-27

[9]
Signature identification based on immunogenic cell death-related lncRNAs to predict the prognosis and immune activity of patients with endometrial carcinoma.

Transl Cancer Res. 2024-6-30

[10]
Bioinformatics prediction and experimental verification identify a cuproptosis-related gene signature as prognosis biomarkers of hepatocellular carcinoma.

Transl Cancer Res. 2024-6-30

本文引用的文献

[1]
Reduced N6-Methyladenosine Mediated by METTL3 Acetylation Promotes MTF1 Expression and Hepatocellular Carcinoma Cell Growth.

Chem Biodivers. 2022-11

[2]
Comprehensive bioinformatics analysis to identify a novel cuproptosis-related prognostic signature and its ceRNA regulatory axis and candidate traditional Chinese medicine active ingredients in lung adenocarcinoma.

Front Pharmacol. 2022-8-30

[3]
Identification and analysis of necroptosis-associated signatures for prognostic and immune microenvironment evaluation in hepatocellular carcinoma.

Front Immunol. 2022

[4]
Identification of Pyroptosis Gene Signature Related Molecular Pattern, Clinical Implication, and Tumor Immunity in Hepatocellular Carcinoma`.

Comb Chem High Throughput Screen. 2023

[5]
Cuproptosis-Associated lncRNA Establishes New Prognostic Profile and Predicts Immunotherapy Response in Clear Cell Renal Cell Carcinoma.

Front Genet. 2022-7-15

[6]
A Novel Cuproptosis-Related Prognostic Gene Signature and Validation of Differential Expression in Clear Cell Renal Cell Carcinoma.

Genes (Basel). 2022-5-10

[7]
Selective Targeting of Cancer Cells by Copper Ionophores: An Overview.

Front Mol Biosci. 2022-3-4

[8]
Copper induces cell death by targeting lipoylated TCA cycle proteins.

Science. 2022-3-18

[9]
Connecting copper and cancer: from transition metal signalling to metalloplasia.

Nat Rev Cancer. 2022-2

[10]
PDL1-positive exosomes suppress antitumor immunity by inducing tumor-specific CD8 T cell exhaustion during metastasis.

Cancer Sci. 2021-9

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索