• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

生物信息学预测和实验验证确定了一种铜死亡相关基因特征作为肝细胞癌的预后生物标志物。

Bioinformatics prediction and experimental verification identify a cuproptosis-related gene signature as prognosis biomarkers of hepatocellular carcinoma.

作者信息

Wang Weiwei, He Zhiguo, Jia Haowen, Zhang Jiansheng, Qi Feng

机构信息

Department of General Surgery, Baodi Clinical College, Tianjin Medical University, Tianjin, China.

Department of General Surgery, Tianjin Medical University General Hospital Airport Hospital, Tianjin, China.

出版信息

Transl Cancer Res. 2024 Jun 30;13(6):2985-3002. doi: 10.21037/tcr-23-1561. Epub 2024 Jun 27.

DOI:10.21037/tcr-23-1561
PMID:38988944
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11231784/
Abstract

BACKGROUND

Hepatocellular carcinoma (HCC) of which its prognostic prediction is still unclarified is a highly heterogeneous disease. Cuproptosis is a form of cell death that depends on copper regulation. Whether the cuproptosis-related genes can be the prognostic indicators of HCC is yet to be elucidated. The aim of this study is to investigate whether cuproptosis-related genes play a role in HCC and can be used as a diagnostic index to predict the occurrence of liver cancer.

METHODS

We downloaded HCC patients' gene expression profiles and their corresponding clinical data from a public database. To screen data, we used single factor Cox regression analysis, meanwhile, polymerase chain reaction (PCR) was used for the verification. After that, the risk score was calculated and the relationship between risk score and clinical factors was analyzed. Besides, a nomogram map was constructed for predicting the prognosis of HCC, and calibration map and decision curve analysis (DCA) map were used to test the model.

RESULTS

Compared to the high expression group of four cuproptosis-related genes, the low expression group showed better overall survival (OS) [hazard ratio (HR) =2.58; 95% confidence interval (CI): 1.72-3.89, P<0.01]. The expression of the four cuproptosis-relate genes increased in liver cancer cell lines compared to liver cell lines (P<0.05). Based on these four genes, we calculated the risk score and divided them into two groups as high-risk group and low-risk group. The risk factor map showed the high-risk group had shorter survival time and the four genes were highly expressed. The area under curve (AUC) of receiver operating characteristic (ROC) prediction curve for the first year was 0.726. Risk scores were closely related to clinical factors and immune cells. Finally, we constructed a nomogram for predicting the prognosis of HCC.

CONCLUSIONS

The risk score for cuproptosis-related genes was established and involved in the construction of the nomogram, providing a new perspective on the prognosis and copper metabolism of HCC.

摘要

背景

肝细胞癌(HCC)是一种高度异质性疾病,其预后预测仍不明确。铜死亡是一种依赖铜调节的细胞死亡形式。铜死亡相关基因是否可作为HCC的预后指标尚待阐明。本研究旨在探讨铜死亡相关基因在HCC中是否起作用,以及能否作为预测肝癌发生的诊断指标。

方法

我们从一个公共数据库下载了HCC患者的基因表达谱及其相应的临床数据。为筛选数据,我们采用单因素Cox回归分析,同时,使用聚合酶链反应(PCR)进行验证。之后,计算风险评分并分析风险评分与临床因素之间的关系。此外,构建了用于预测HCC预后的列线图,并使用校准图和决策曲线分析(DCA)图来检验该模型。

结果

与四个铜死亡相关基因的高表达组相比,低表达组显示出更好的总生存期(OS)[风险比(HR)=2.58;95%置信区间(CI):1.72 - 3.89,P<0.01]。与肝细胞系相比,四个铜死亡相关基因在肝癌细胞系中的表达增加(P<0.05)。基于这四个基因,我们计算了风险评分并将其分为高危组和低危组。风险因素图显示高危组生存时间较短且这四个基因高表达。第一年的受试者操作特征(ROC)预测曲线的曲线下面积(AUC)为0.726。风险评分与临床因素和免疫细胞密切相关。最后,我们构建了一个用于预测HCC预后的列线图。

结论

建立了铜死亡相关基因的风险评分并参与列线图的构建,为HCC的预后和铜代谢提供了新的视角。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/b1997c452e88/tcr-13-06-2985-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/d6e4c031544d/tcr-13-06-2985-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/ff64d7eca2ff/tcr-13-06-2985-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/c1adf57bd30d/tcr-13-06-2985-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/1da7975e8a80/tcr-13-06-2985-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/e5a9fd730207/tcr-13-06-2985-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/1e08f2de3803/tcr-13-06-2985-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/0ee648e8cb40/tcr-13-06-2985-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/b1997c452e88/tcr-13-06-2985-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/d6e4c031544d/tcr-13-06-2985-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/ff64d7eca2ff/tcr-13-06-2985-f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/c1adf57bd30d/tcr-13-06-2985-f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/1da7975e8a80/tcr-13-06-2985-f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/e5a9fd730207/tcr-13-06-2985-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/1e08f2de3803/tcr-13-06-2985-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/0ee648e8cb40/tcr-13-06-2985-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3536/11231784/b1997c452e88/tcr-13-06-2985-f8.jpg

相似文献

1
Bioinformatics prediction and experimental verification identify a cuproptosis-related gene signature as prognosis biomarkers of hepatocellular carcinoma.生物信息学预测和实验验证确定了一种铜死亡相关基因特征作为肝细胞癌的预后生物标志物。
Transl Cancer Res. 2024 Jun 30;13(6):2985-3002. doi: 10.21037/tcr-23-1561. Epub 2024 Jun 27.
2
A Cuproptosis-Related LncRNA Risk Model for Predicting Prognosis and Immunotherapeutic Efficacy in Patients with Hepatocellular Carcinoma.铜死亡相关长链非编码 RNA 风险模型预测肝细胞癌患者的预后和免疫治疗疗效。
Biochem Genet. 2024 Jun;62(3):2332-2351. doi: 10.1007/s10528-023-10539-x. Epub 2023 Oct 29.
3
A novel cuproptosis-related lncRNA signature predicts the prognosis and immunotherapy for hepatocellular carcinoma.一种新型铜死亡相关 lncRNA 标志物可预测肝细胞癌的预后和免疫治疗效果。
Cancer Biomark. 2023;37(1):13-26. doi: 10.3233/CBM-220259.
4
Novel Molecular Subtyping Scheme Based on In Silico Analysis of Cuproptosis Regulator Gene Patterns Optimizes Survival Prediction and Treatment of Hepatocellular Carcinoma.基于铜死亡调节基因模式的计算机分析的新型分子分型方案优化了肝细胞癌的生存预测和治疗
J Clin Med. 2023 Sep 5;12(18):5767. doi: 10.3390/jcm12185767.
5
Cuproptosis-related molecular classification and gene signature of hepatocellular carcinoma and experimental verification.肝细胞癌的铜死亡相关分子分类及基因特征与实验验证
Transl Cancer Res. 2024 Mar 31;13(3):1268-1289. doi: 10.21037/tcr-23-1876. Epub 2024 Mar 27.
6
Signature construction and molecular subtype identification based on cuproptosis-related genes to predict the prognosis and immune activity of patients with hepatocellular carcinoma.基于铜死亡相关基因的signature 构建和分子亚型鉴定,预测肝细胞癌患者的预后和免疫活性。
Front Immunol. 2022 Sep 28;13:990790. doi: 10.3389/fimmu.2022.990790. eCollection 2022.
7
Cuproptosis-Related Signature Predicts the Prognosis, Tumor Microenvironment, and Drug Sensitivity of Hepatocellular Carcinoma.铜死亡相关特征可预测肝细胞癌的预后、肿瘤微环境和药物敏感性。
J Immunol Res. 2022 Nov 16;2022:3393027. doi: 10.1155/2022/3393027. eCollection 2022.
8
A prognostic signature of cuproptosis and TCA-related genes for hepatocellular carcinoma.一种用于肝细胞癌的铜死亡和三羧酸循环相关基因的预后特征。
Front Oncol. 2022 Oct 17;12:1040736. doi: 10.3389/fonc.2022.1040736. eCollection 2022.
9
A cuproptosis-related lncRNA signature for predicting prognosis and immune response in hepatocellular carcinoma.一种用于预测肝细胞癌预后和免疫反应的铜死亡相关长链非编码RNA特征
Heliyon. 2023 Aug 29;9(9):e19352. doi: 10.1016/j.heliyon.2023.e19352. eCollection 2023 Sep.
10
Cuproptosis-related long non-coding RNAs model that effectively predicts prognosis in hepatocellular carcinoma.可有效预测肝细胞癌预后的铜死亡相关长链非编码RNA模型。
World J Gastrointest Oncol. 2022 Oct 15;14(10):1981-2003. doi: 10.4251/wjgo.v14.i10.1981.

引用本文的文献

1
Targeting cuproptosis in liver cancer: Molecular mechanisms and therapeutic implications.靶向肝癌中的铜死亡:分子机制与治疗意义
Apoptosis. 2025 Aug 7. doi: 10.1007/s10495-025-02150-9.

本文引用的文献

1
MELK promotes HCC carcinogenesis through modulating cuproptosis-related gene DLAT-mediated mitochondrial function.MELK 通过调节铜死亡相关基因 DLAT 介导的线粒体功能促进 HCC 癌变。
Cell Death Dis. 2023 Nov 11;14(11):733. doi: 10.1038/s41419-023-06264-3.
2
A novel cuproptosis-related prognostic gene signature and validation of differential expression in hepatocellular carcinoma.一种新型铜死亡相关预后基因特征及其在肝细胞癌中差异表达的验证
Front Pharmacol. 2023 Jan 10;13:1081952. doi: 10.3389/fphar.2022.1081952. eCollection 2022.
3
Copper transporter gene ATP7A: A predictive biomarker for immunotherapy and targeted therapy in hepatocellular carcinoma.
铜转运蛋白基因ATP7A:肝细胞癌免疫治疗和靶向治疗的预测生物标志物。
Int Immunopharmacol. 2023 Jan;114:109518. doi: 10.1016/j.intimp.2022.109518. Epub 2022 Dec 8.
4
Analysis of cuproptosis in hepatocellular carcinoma using multi-omics reveals a comprehensive HCC landscape and the immune patterns of cuproptosis.利用多组学分析肝细胞癌中的铜死亡揭示了全面的肝癌格局和铜死亡的免疫模式。
Front Oncol. 2022 Nov 2;12:1009036. doi: 10.3389/fonc.2022.1009036. eCollection 2022.
5
Copper induces cell death by targeting lipoylated TCA cycle proteins.铜通过靶向脂酰化 TCA 循环蛋白诱导细胞死亡。
Science. 2022 Mar 18;375(6586):1254-1261. doi: 10.1126/science.abf0529. Epub 2022 Mar 17.
6
Synergistic Multimodal Cancer Therapy Using Glucose Oxidase@CuS Nanocomposites.基于葡萄糖氧化酶@CuS 纳米复合材料的协同多模态癌症治疗。
ACS Appl Mater Interfaces. 2021 Sep 8;13(35):41464-41472. doi: 10.1021/acsami.1c12235. Epub 2021 Aug 27.
7
Copper-Based Nanoscale Coordination Polymers Augmented Tumor Radioimmunotherapy for Immunogenic Cell Death Induction and T-Cell Infiltration.铜基金属纳米配位聚合物增强肿瘤放射免疫治疗诱导免疫原性细胞死亡和 T 细胞浸润。
Small. 2021 Feb;17(8):e2006231. doi: 10.1002/smll.202006231. Epub 2021 Feb 1.
8
The Multifaceted Roles of Copper in Cancer: A Trace Metal Element with Dysregulated Metabolism, but Also a Target or a Bullet for Therapy.铜在癌症中的多面角色:一种代谢失调的痕量金属元素,但也是治疗的靶点或手段。
Cancers (Basel). 2020 Dec 1;12(12):3594. doi: 10.3390/cancers12123594.
9
Turning Cold into Hot: Firing up the Tumor Microenvironment.化寒为热:点燃肿瘤微环境
Trends Cancer. 2020 Jul;6(7):605-618. doi: 10.1016/j.trecan.2020.02.022. Epub 2020 Mar 21.
10
Progress in the Enzymology of the Mitochondrial Diseases of Lipoic Acid Requiring Enzymes.需要硫辛酸的线粒体疾病相关酶的酶学研究进展
Front Genet. 2020 May 21;11:510. doi: 10.3389/fgene.2020.00510. eCollection 2020.