Suppr超能文献

豆科植物中酰基辅酶A结合蛋白的全基因组鉴定及可能的功能预测

Genome-wide identification of acyl-CoA binding proteins and possible functional prediction in legumes.

作者信息

Ling Juan, Li Lingyu, Lin Lifeng, Xie Hui, Zheng Yixiong, Wan Xiaorong

机构信息

Guangzhou key laboratory for research and development of crop germplasm resources, Zhongkai University of Agriculture and Engineering, Guangzhou, China.

出版信息

Front Genet. 2023 Jan 10;13:1057160. doi: 10.3389/fgene.2022.1057160. eCollection 2022.

Abstract

Acyl-CoA-binding proteins (ACBPs), members of a vital housekeeping protein family, are present in various animal and plant species. They are divided into four classes: small ACBPs (class I), ankyrin-repeat ACBPs (class II), large ACBPs (class III), and kelch-ACBPs (class IV). Plant ACBPs play a pivotal role in intracellular transport, protection, and pool formation of acyl-CoA esters, promoting plant development and stress response. Even though legume crops are important for vegetable oils, proteins, vegetables and green manure, legume ACBPs are not well investigated. To comprehensively explore the functions of ACBPs in nine legumes (, , , s, , , , and ), we conducted genome-wide identification of the ACBP gene family. Our evolutionary analyses included phylogenetics, gene structure, the conserved motif, chromosomal distribution and homology, subcellular localization, cis-elements, and interacting proteins. The results revealed that ACBP Orthologs of nine legumes had a high identity in gene structure and conserved motif. However, subcellular localization, cis-acting elements, and interaction protein analyses revealed potentially different functions from previously reported. The predicted results were also partially verified in . We believe that our findings will help researchers understand the roles of ACBPs in legumes and encourage them to conduct additional research.

摘要

酰基辅酶A结合蛋白(ACBPs)是一个重要的管家蛋白家族成员,存在于各种动植物物种中。它们分为四类:小ACBPs(I类)、锚蛋白重复ACBPs(II类)、大ACBPs(III类)和kelch-ACBPs(IV类)。植物ACBPs在酰基辅酶A酯的细胞内运输、保护和库形成中起关键作用,促进植物发育和应激反应。尽管豆类作物对植物油、蛋白质、蔬菜和绿肥很重要,但豆类ACBPs尚未得到充分研究。为了全面探索ACBPs在九种豆类(、、、、、、、和)中的功能,我们对ACBP基因家族进行了全基因组鉴定。我们的进化分析包括系统发育学、基因结构、保守基序、染色体分布和同源性、亚细胞定位、顺式元件和相互作用蛋白。结果表明,九种豆类的ACBP直系同源物在基因结构和保守基序上具有高度同一性。然而,亚细胞定位、顺式作用元件和相互作用蛋白分析揭示了与先前报道可能不同的功能。预测结果也在中得到了部分验证。我们相信我们的发现将有助于研究人员了解ACBPs在豆类中的作用,并鼓励他们进行更多的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4686/9871394/9cab32421b50/fgene-13-1057160-g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验