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软骨素酶ABC I代表性工程重组体的酶动力学特征

Enzyme Kinetics Features of the Representative Engineered Recombinants of Chondroitinase ABC I.

作者信息

Moradi Khadijeh, Bayani Zahra, Jafarian Vahab, Shirdel Akram

机构信息

Department of Biology, Faculty of Sciences, University of Zanjan, Zanjan, Iran.

Department of Biochemistry, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.

出版信息

Protein J. 2023 Feb;42(1):55-63. doi: 10.1007/s10930-023-10093-w. Epub 2023 Jan 30.

Abstract

Chondroitinase ABC I (cABC I) from Proteus vulgaris is an important enzyme in medicinal biotechnology due to its ability to help axon regeneration after spinal cord injury. Its practical application involves solving several problems at the molecular and cellular levels. Structurally, most residues at the C-terminal domain of cABC I are arranged as organized strands, and only a small fraction of residues have helical conformation. The structural and functional features of modified residues on two specific helix fragments have previously been reported. The single mutant M889K has been combined with L679S and L679D mutants to make enzyme variants containing simultaneously modified helix. Here, the pH stability and temperature-based analysis of the transition state structure for the catalysis reaction were investigated. We found that double mutant L679D/M889K is the better choice to use in physiological conditions due to its higher pH stability at physiological pH as well as its different optimum temperature as compared with the (wild-type) WT protein. According to Arrhenius's analysis, the values of the Gibbs free energy of the transition state (∆G) are not changed upon mutation. However, the relative contribution and absolute values of the enthalpy and entropy change to the total value of ∆G, varied between the WT and mutants.

摘要

普通变形杆菌的软骨素酶ABC I(cABC I)是医学生物技术中的一种重要酶,因为它能够促进脊髓损伤后的轴突再生。其实际应用涉及解决分子和细胞水平上的几个问题。在结构上,cABC I C端结构域的大多数残基排列成有组织的链状,只有一小部分残基具有螺旋构象。此前已经报道了两个特定螺旋片段上修饰残基的结构和功能特征。单突变体M889K已与L679S和L679D突变体组合,以制备同时含有修饰螺旋的酶变体。在此,我们研究了催化反应过渡态结构的pH稳定性和基于温度的分析。我们发现,双突变体L679D/M889K是在生理条件下使用的更好选择,因为它在生理pH下具有更高的pH稳定性,并且与野生型(WT)蛋白相比具有不同的最适温度。根据阿伦尼乌斯分析,突变后过渡态吉布斯自由能(∆G)的值没有变化。然而,WT和突变体之间,焓变和熵变对∆G总值的相对贡献和绝对值有所不同。

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