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高通量自动化人体代谢表型分析中扩散排序 NMR 光谱实验的优化。

Optimization of Diffusion-Ordered NMR Spectroscopy Experiments for High-Throughput Automation in Human Metabolic Phenotyping.

机构信息

Section of Bioanalytical Chemistry, Division of Systems Medicine, Department of Metabolism, Digestion and Reproduction, Imperial College London, Burlington Danes Building, Hammersmith Hospital Campus, London W12 0NN, U.K.

National Phenome Centre, Department of Metabolism, Digestion and Reproduction, Imperial College London,

出版信息

Anal Chem. 2023 Feb 14;95(6):3147-3152. doi: 10.1021/acs.analchem.2c04066. Epub 2023 Jan 31.

Abstract

The diffusion-ordered nuclear magnetic resonance spectroscopy (DOSY) experiment allows the calculation of diffusion coefficient values of metabolites in complex mixtures. However, this experiment has not yet been broadly used for metabolic profiling due to lack of a standardized protocol. Here we propose a pipeline for the DOSY experimental setup and data processing in metabolic phenotyping studies. Due to the complexity of biological samples, three experiments (a standard DOSY, a relaxation-edited DOSY, and a diffusion-edited DOSY) have been optimized to provide DOSY metabolic profiles with peak-picked diffusion coefficients for over 90% of signals visible in the one-dimensional H general biofluid profile in as little as 3 min 36 s. The developed parameter sets and tools are straightforward to implement and can facilitate the use of DOSY for metabolic profiling of human blood plasma and urine samples.

摘要

扩散排序核磁共振波谱(DOSY)实验可计算复杂混合物中代谢物的扩散系数值。然而,由于缺乏标准化方案,该实验尚未广泛用于代谢物分析。本研究提出了一种用于代谢表型研究中 DOSY 实验设置和数据处理的方案。由于生物样本的复杂性,我们优化了三个实验(标准 DOSY、弛豫编辑 DOSY 和扩散编辑 DOSY),以便在短短 3 分 36 秒内,为一维 H 总生物流体图谱中可见信号的 90%以上提供具有峰采扩散系数的 DOSY 代谢图谱。所开发的参数集和工具易于实现,可以促进 DOSY 在人类血浆和尿液样本代谢物分析中的应用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c906/9933041/990d9c4fdba7/ac2c04066_0001.jpg

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