Li Yan, Lian Di, Wang Jiahao, Zhao Yue, Li Yao, Liu Guoshi, Wu Sen, Deng Shoulong, Du Xuguang, Lian Zhengxing
Beijing Key Laboratory for Animal Genetic Improvement, National Engineering Laboratory for Animal Breeding, College of Animal Science and Technology, China Agricultural University, Beijing 100193, China.
State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, Beijing 100193, China.
Mol Ther Nucleic Acids. 2023 Jan 2;31:309-323. doi: 10.1016/j.omtn.2022.12.020. eCollection 2023 Mar 14.
CRISPR-Cas9-mediated genome editing in sheep is of great use in both agricultural and biomedical applications. While targeted gene knockout by CRISPR-Cas9 through non-homologous end joining (NHEJ) has worked efficiently, the knockin efficiency via homology-directed repair (HDR) remains lower, which severely hampers the application of precise genome editing in sheep. Here, in sheep fetal fibroblasts (SFFs), we optimized several key parameters that affect HDR, including homology arm (HA) length and the amount of double-stranded DNA (dsDNA) repair template; we also observed synchronization of SFFs in G2/M phase could increase HDR efficiency. Besides, we identified three potent small molecules, RITA, Nutlin3, and CTX1, inhibitors of p53-MDM2 interaction, that caused activation of the p53 pathway, resulting in distinct G2/M cell-cycle arrest in response to DNA damage and improved CRISPR-Cas9-mediated HDR efficiency by 1.43- to 4.28-fold in SFFs. Furthermore, we demonstrated that genetic knockout of could inhibit HDR in SFFs by suppressing the expression of several key factors involved in the HDR pathway, such as and . Overall, this study offers an optimized strategy for the usage of dsDNA repair template, more importantly, the application of MDM2 antagonists provides a simple and efficient strategy to promote CRISPR/Cas9-mediated precise genome editing in sheep primary cells.
CRISPR-Cas9介导的绵羊基因组编辑在农业和生物医学应用中都有很大用途。虽然通过非同源末端连接(NHEJ)利用CRISPR-Cas9进行靶向基因敲除已高效实现,但通过同源定向修复(HDR)的敲入效率仍然较低,这严重阻碍了精确基因组编辑在绵羊中的应用。在此,在绵羊胎儿成纤维细胞(SFFs)中,我们优化了几个影响HDR的关键参数,包括同源臂(HA)长度和双链DNA(dsDNA)修复模板的量;我们还观察到将SFFs同步到G2/M期可提高HDR效率。此外,我们鉴定出三种有效的小分子,即RITA、Nutlin3和CTX1,它们是p53-MDM2相互作用的抑制剂,可导致p53通路激活,从而在DNA损伤时引起明显的G2/M细胞周期阻滞,并使SFFs中CRISPR-Cas9介导的HDR效率提高1.43至4.28倍。此外,我们证明基因敲除 可通过抑制HDR途径中涉及的几个关键因子(如 和 )的表达来抑制SFFs中的HDR。总体而言,本研究提供了一种优化的dsDNA修复模板使用策略,更重要的是,MDM2拮抗剂的应用提供了一种简单有效的策略,以促进绵羊原代细胞中CRISPR/Cas9介导的精确基因组编辑。