Nanobiosensorics Group, Research Centre for Energy Research, Institute for Technical Physics and Materials Science, Konkoly-Thege u 29-33, 1121 Budapest, Hungary.
Nanobiosensorics Group, Research Centre for Energy Research, Institute for Technical Physics and Materials Science, Konkoly-Thege u 29-33, 1121 Budapest, Hungary.
Int J Biol Macromol. 2023 Apr 1;233:123528. doi: 10.1016/j.ijbiomac.2023.123528. Epub 2023 Feb 2.
The label-free interaction analysis of macromolecules and small molecules has increasing importance nowadays, both in diagnostics and therapeutics. In the blood vascular system, human serum albumin (HSA) is a vital globular transport protein with potential multiple ligand binding sites. Characterizing the binding affinity of compounds to HSA is essential in pharmaceutics and in developing new compounds for clinical application. Aryltetralin lignans from the roots of Anthriscus sylvestris are potential antitumor therapeutic candidates, but their molecular scale interactions with specific biomolecules are unrevealed. Here, we applied the label-free grating-coupled interferometry (GCI) biosensing method with a polycarboxylate-based hydrogel layer with immobilized HSA on top of it. With this engineered model surface, we could determine the binding parameters of two novel aryltetralin lignans, deoxypodophyllotoxin (DPT), and angeloyl podophyllotoxin (APT) to HSA. Exploiting the multi-channel referencing ability, the unique surface sensitivity, and the throughput of GCI, we first revealed the specific biomolecular interactions. Traditional label-free kinetic measurements were also compared with a novel, fast way of measuring affinity kinetics using less sample material (repeated analyte pulses of increasing duration (RAPID)). Experiments with well-characterized molecular interactions (furosemide to carbonic-anhydrase (CAII) and warfarin, norfloxacin to HSA) were performed to prove the reliability of the RAPID method. In all investigated cases, the RAPID and traditional measurement gave similar affinity values. In the case of DPT, the measurements and relevant modeling suggested two binding sites on HSA, with dissociation constant values of K = 1.8 ± 0.01 μM, K = 3 ± 0.02 μM. In the case of APT, the experiments resulted in K = 9 ± 1.7 μM, K = 28 ± 0.3 μM. The obtained binding values might suggest the potential medical application of DPT and APT without further optimization of their binding affinity to HSA. These results could be also adapted to other biomolecules and applications where sample consumption and the rapidity of the measurements are critical.
无标记相互作用分析大分子和小分子在当今的诊断和治疗中变得越来越重要。在血管系统中,人血清白蛋白(HSA)是一种重要的球形转运蛋白,具有潜在的多个配体结合位点。描述化合物与 HSA 的结合亲和力对于药剂学和开发新的临床应用化合物至关重要。从 Anthriscus sylvestris 的根中提取的芳基四氢呋喃木质素是有潜力的抗肿瘤治疗候选物,但它们与特定生物分子的分子相互作用尚不清楚。在这里,我们应用无标记光栅耦合干涉(GCI)生物传感方法,在其顶部使用基于多羧酸的水凝胶层固定 HSA。利用这种工程模型表面,我们可以确定两种新型芳基四氢呋喃木质素,脱氧鬼臼毒素(DPT)和酰基鬼臼毒素(APT)与 HSA 的结合参数。利用多通道参考能力、独特的表面灵敏度和 GCI 的吞吐量,我们首先揭示了特定的生物分子相互作用。还将传统的无标记动力学测量与使用较少样品材料(增加持续时间的重复分析物脉冲(RAPID))的新型快速测量亲和力动力学的方法进行了比较。使用具有良好特征的分子相互作用(呋塞米与碳酸酐酶(CAII)和华法林、诺氟沙星与 HSA)进行实验,以证明 RAPID 方法的可靠性。在所研究的所有情况下,RAPID 和传统测量都给出了相似的亲和力值。在 DPT 的情况下,测量和相关建模表明 HSA 上有两个结合位点,解离常数 K 值为 1.8±0.01μM,K 值为 3±0.02μM。在 APT 的情况下,实验得出 K 值为 9±1.7μM,K 值为 28±0.3μM。获得的结合值可能表明 DPT 和 APT 具有潜在的医疗应用,而无需进一步优化它们与 HSA 的结合亲和力。这些结果还可以适应其他生物分子和应用,在这些应用中,样品消耗和测量的快速性至关重要。