Gam Zouhaier Ben Ali, Thioye Abdoulaye, Cayol Jean-Luc, Postec Anne, Bartoli-Joseph Manon, Vandecasteele Céline, Erauso Gaël, Labat Marc
Aix Marseille Université, Université de Toulon, CNRS, IRD, MIO, Mediterranean Institute of Oceanography, 163 avenue de Luminy, F-13288, Marseille, France.
Université Cheikh Anta Diop, Ecole Supérieure Polytechnique, Laboratoire de Microbiologie Appliquée et de Génie Industriel, BP 5005, Dakar-Fann, Dakar, Sénégal.
Int J Syst Evol Microbiol. 2023 Feb;73(1). doi: 10.1099/ijsem.0.005690.
A novel thermophilic, anaerobic bacterium, strain F1F22, was isolated from hot spring water collected in northern Tunisia. The cells were non-motile, Gram-negative and helical with hooked ends, 0.5×10-32 µm in size. Growth of the strain was observed at 45-70 °C (optimum, 55 °C), in 0.0-1.0 % (w/v) NaCl (optimum without NaCl) and at pH 6.5-8.5 (optimum, pH 7.5). Yeast extract was required for growth, and the strain grew on glucose, sucrose and maltose. The major fatty acids were C (40.2 %), iso-C (30.2 %) and C DMA (14.5 %). The genome consisted of a circular chromosome (2.5 Mb) containing 2672 predicted protein-encoding genes with a G+C content of 43.15 mol %. Based on a comparative 16S rRNA gene sequence analysis, strain F1F22 formed a deeply branching lineage within the phylum , class , order , and had only low sequence similarity to other species of the phylum (lower than 83 %). Genome-based analysis of average nucleotide identity and digital DNA-DNA hybridization of strain F1F22 with DSM 7334, ATCC 43811 and DSM 6578 showed values between 63.26 and 63.52 %, and between 20 and 25 %. Hence, we propose strain F1F22 as a representative of a novel family ( fam. nov.), genus and species of : gen. nov., sp. nov. (type strain F1F22=JCM 31314=DSM 101182).
从突尼斯北部采集的温泉水中分离出一种新型嗜热厌氧菌,菌株F1F22。细胞无运动性,革兰氏阴性,呈螺旋状且末端带钩,大小为0.5×10 - 32μm。该菌株在45 - 70°C(最适温度为55°C)、0.0 - 1.0%(w/v)NaCl(最适条件下无NaCl)以及pH 6.5 - 8.5(最适pH为7.5)的环境中生长。生长需要酵母提取物,该菌株能在葡萄糖、蔗糖和麦芽糖上生长。主要脂肪酸为C(40.2%)、异C(30.2%)和C DMA(14.5%)。基因组由一个环状染色体(2.5 Mb)组成,包含2672个预测的蛋白质编码基因,G + C含量为43.15 mol%。基于比较16S rRNA基因序列分析,菌株F1F22在门、纲、目内形成一个深度分支的谱系,与该门的其他物种只有低序列相似性(低于83%)。对菌株F1F22与DSM 7334、ATCC 43811和DSM 6578进行基于基因组的平均核苷酸同一性和数字DNA - DNA杂交分析,结果显示值在63.26%至63.52%之间,以及在20%至25%之间。因此,我们提议将菌株F1F22作为一个新科(新科)、新属和新种的代表:新属,新种(模式菌株F1F22 = JCM 31314 = DSM 101182)。