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光诱导在蓝藻菌视紫红质 TePixJ 中形成和断裂键的分子机制。

The molecular mechanism of light-induced bond formation and breakage in the cyanobacteriochrome TePixJ.

机构信息

Department of Chemistry, University of Zurich, Zurich, Switzerland.

Institute of Biology, Humboldt University Berlin, Germany.

出版信息

Phys Chem Chem Phys. 2023 Feb 22;25(8):6016-6024. doi: 10.1039/d2cp05856a.

Abstract

Cyanobacteriochromes (CBCRs) are small and versatile photoreceptor proteins with high potential for biotechnological applications. Among them, the so-called DXCF-CBCRs exhibit an intricate secondary photochemistry: miliseconds after activation with light, a covalent linkage between a conserved cysteine residue and the light-absorbing tetrapyrrole chromophore is reversibly formed or broken. We employed time-resolved IR spectroscopy over ten orders of magnitude in time in conjunction with 2D-IR spectroscopy to investigate the molecular mechanism of this intriguing reaction in the DXCF-CBCR model system TePixJ from . The crosspeak pattern in the 2D-IR spectrum facilitated the assignment of the dominant signals to vibrational modes of the chromophore, which in turn enabled us to construct a mechanistic model for the photocycle reactions from the time-resolved IR spectra. Here, we assigned the time-resolved signals to several proton transfer steps and distinct geometric changes of the chromophore. We propose a model that describes how these events lead to the rearrangement of charges in the chromophore binding pocket, which serves as the trigger for the light-induced bond formation and breakage with the nearby cysteine.

摘要

蓝藻细菌视紫红质(CBCRs)是一种小型且多功能的光受体蛋白,具有很高的生物技术应用潜力。其中,所谓的 DXCF-CBCRs 表现出复杂的二次光化学:在光激活后毫秒内,保守半胱氨酸残基和光吸收四吡咯发色团之间形成或打破共价键。我们采用时间分辨红外光谱在十次方时间范围内结合二维红外光谱研究了 DXCF-CBCR 模型体系 TePixJ 中这种有趣反应的分子机制。二维红外光谱中的交叠峰模式有助于将主要信号分配给发色团的振动模式,这反过来使我们能够从时间分辨红外光谱构建光循环反应的机制模型。在这里,我们将时间分辨信号分配给几个质子转移步骤和发色团的不同几何变化。我们提出了一个模型,描述了这些事件如何导致发色团结合口袋中电荷的重新排列,这是光诱导键形成和与附近半胱氨酸断裂的触发因素。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dc96/9945933/a2d6142b304a/d2cp05856a-f1.jpg

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