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热应激蛋白70()和90()中的单核苷酸多态性与巴基斯坦绵羊品种对血液寄生虫感染易感性的关联。

Association of single nucleotide polymorphisms in heat stress protein 70 () and 90 () with the susceptibility of Pakistani sheep breeds to hemoparasitic infections.

作者信息

Sheraz Muhammad, Ud Din Fakhur, Saad Un Nabi Muhammad, Rao Sana, Shafiq Bisma, Murtaza Ghulam, Farooq Muhammad, Iqbal Furhan

机构信息

Institute of Zoology, Bahauddin Zakariya University, Multan, Pakistan.

Department of Zoology, Ghazi University, Dera Ghazi Khan, Pakistan.

出版信息

Anim Biotechnol. 2023 Dec;34(9):4608-4615. doi: 10.1080/10495398.2023.2174878. Epub 2023 Feb 9.

Abstract

The present study was designed to report the genotypic and allelic frequency of single nucleotide polymorphism (SNP) at 222 G > A in and at ex6-7390T22G in the gene of 204 sheep (Baluchi = 11, Kajli = 29, Latti = 06 and Mundri = 158) enrolled from District Rajanpur in Punjab and to report the susceptibility of these sheep to the blood-borne parasitic infection. The tetra-primer amplification refractory mutation system-polymerase chain reaction (T-ARMS-PCR) approach revealed a significant variation ( < 0.001) in the genotype frequency of four enrolled sheep breeds at SNP 222 G > A in the gene while the allelic frequency remained unaffected ( = 0.08). In all sheep breeds, GG (wild) genotype was most common. T-ARMS-PCR analysis revealed a similar trend for ex6-7390T22G in the gene and it was observed that sheep had significantly higher wild-type (GG) ( < 0.05) at the studied SNPs. Studied epidemiological factors (sex and sampling sites) were not found associated with both SNPs. Chi-square test revealed that no specific genotype and allelic frequency at 222 G > A in and at ex6-7390T22G in the gene of the enrolled sheep breed was associated with the susceptibility to blood-borne parasitic infection ( > 0.05). In conclusion, we are reporting that Pakistan is blessed to have majority of sheep, from all breeds, having wild genotype at analyzed SNPs in heat stress genes. We highly recommend the genotypic screening of sheep before their selection as breeders to reduce the possibility of having sheep with polymorphic genotypes at 222 G > A in and at 7390T22G in genes that will improve the profitability and sustainability of animal production systems in Pakistan.

摘要

本研究旨在报告从旁遮普省拉詹布尔地区选取的204只绵羊(俾路支羊=11只、卡吉里羊=29只、拉蒂羊=6只和蒙德里羊=158只)中,基因222 G > A处单核苷酸多态性(SNP)以及基因外显子6-7390T22G处的基因型和等位基因频率,并报告这些绵羊对血源寄生虫感染的易感性。四引物扩增不应突变系统-聚合酶链反应(T-ARMS-PCR)方法显示,在所研究的四个绵羊品种中,基因SNP 222 G > A处的基因型频率存在显著差异( < 0.001),而等位基因频率未受影响( = 0.08)。在所有绵羊品种中,GG(野生型)基因型最为常见。T-ARMS-PCR分析显示,基因外显子6-7390T22G处也有类似趋势,并且观察到绵羊在所研究的SNP处野生型(GG)显著更高( < 0.05)。所研究的流行病学因素(性别和采样地点)与这两个SNP均未发现关联。卡方检验显示,所选取绵羊品种的基因222 G > A处以及基因外显子6-7390T22G处的特定基因型和等位基因频率与血源寄生虫感染的易感性无关( > 0.05)。总之,我们报告巴基斯坦有幸拥有大多数品种的绵羊,在热应激基因的分析SNP处具有野生型基因型。我们强烈建议在选择种羊之前对绵羊进行基因型筛查,以降低拥有基因222 G > A处和基因7390T22G处具有多态基因型绵羊的可能性,这将提高巴基斯坦动物生产系统的盈利能力和可持续性。

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