Marcer Arnald, Escobar Agustí, Garcia-Font Víctor, Uribe Francesc
CREAF, E08193 Bellaterra (Cerdanyola del Vallès), Catalonia, Spain CREAF E08193 Bellaterra (Cerdanyola del Vallès), Catalonia Spain.
Universitat Autònoma de Barcelona, E 08193, Bellaterra (Cerdanyola del Vallès), Catalonia, Spain Universitat Autònoma de Barcelona E 08193, Bellaterra (Cerdanyola del Vallès), Catalonia Spain.
Biodivers Data J. 2022 Apr 28;10:e81282. doi: 10.3897/BDJ.10.e81282. eCollection 2022.
Georeferencing preserved specimens represents a major effort at the Museu de Ciències Naturals de Barcelona (MCNB), given the available resources and limited staff that can be allocated to the task. Georeferencing is a labour-intensive and hard-to-automate task that requires software tools that can help in making it as efficient as possible. The tool we present, Ali-Bey, has been slowly developed over 15 years and its functionalities have been gradually built in a process of development, testing, use in production and refinement, rather than as a single development cycle out of a comprehensive specifications requirement document. At the start, the MCNB could not find a tool that fully satisfied the requirements listed as essential and made the decision to develop a custom tool. At the end, the initiative has proved successful since it has delivered a new georeferencing tool that meets the MCNB's needs, all in a context of yearly scarce availability of funds. The tool has been gradually matured and developed over the years, in line with the scarce financing. Only recently, after reaching a notable set of novel features, we considered to release it as an open-source project. The MCNB has supported its development up until this date and decided to open it in order to give the NHC community the opportunity to contribute to its development.
We present the software tool Ali-Bey that provides new functionality for the georeferencing of specimens in Natural History Collections, namely the possibility of cooperation between different institutions, the traceability of georeferences and the capability of managing different versions of a same site name, namely for historical reasons. The tool is an open-source web application implemented in Python and the Django framework that leverages other commonly-used specialised geodatabase and map server tools. An API provides access to the geodatabase to externally-developed tools. In addition, for an easy installation, the tool is provided as a multi-container Docker application.
鉴于巴塞罗那自然科学博物馆(MCNB)可用资源有限且能分配到该任务的工作人员不足,对馆藏标本进行地理定位是一项重大工作。地理定位是一项劳动密集型且难以自动化的任务,需要软件工具来尽可能提高其效率。我们展示的工具Ali - Bey经过15年的逐步开发,其功能是在开发、测试、投入生产使用和完善的过程中逐步构建起来的,而不是基于一份全面的规格要求文档进行单一的开发周期。一开始,MCNB找不到完全满足列为基本要求的工具,于是决定开发一个定制工具。最终,该计划取得了成功,因为它在每年资金稀缺的情况下交付了一个满足MCNB需求的新地理定位工具。多年来,该工具随着资金稀缺而逐渐成熟和发展。直到最近,在具备了一系列显著的新特性之后,我们才考虑将其作为一个开源项目发布。到目前为止,MCNB一直在支持其开发,并决定将其开源,以便让自然历史馆藏社区有机会为其发展做出贡献。
我们展示了软件工具Ali - Bey,它为自然历史馆藏标本的地理定位提供了新功能,即不同机构之间合作的可能性、地理参考的可追溯性以及管理同一地名不同版本的能力,这是出于历史原因。该工具是一个用Python和Django框架实现的开源Web应用程序,它利用了其他常用的专业地理数据库和地图服务器工具。一个应用程序编程接口(API)允许外部开发的工具访问地理数据库。此外,为了便于安装,该工具以多容器Docker应用程序的形式提供。