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计算与实验证据支持模板化大环化:氢键网络在 24 原子大环定量二聚反应中的作用。

Computational and Experimental Evidence for Templated Macrocyclization: The Role of a Hydrogen Bond Network in the Quantitative Dimerization of 24-Atom Macrocycles.

机构信息

Department of Chemistry & Biochemistry, Texas Christian University, Fort Worth, TX 76109, USA.

出版信息

Molecules. 2023 Jan 23;28(3):1144. doi: 10.3390/molecules28031144.

Abstract

In the absence of preorganization, macrocyclization reactions are often plagued by oligomeric and polymeric side products. Here, a network of hydrogen bonds was identified as the basis for quantitative yields of macrocycles derived from the dimerization of monomers. Oligomers and polymers were not observed. Macrocyclization, the result of the formation of two hydrazones, was hypothesized to proceed in two steps. After condensation to yield the monohydrazone, a network of hydrogen bonds formed to preorganize the terminal acetal and hydrazine groups for cyclization. Experimental evidence for preorganization derived from macrocycles and acyclic models. Solution NMR spectroscopy and single-crystal X-ray diffraction revealed that the macrocycles isolated from the cyclization reaction were protonated twice. These protons contributed to an intramolecular network of hydrogen bonds that engaged distant carbonyl groups to realize a long-range order. DFT calculations showed that this network of hydrogen bonds contributed 8.7 kcal/mol to stability. Acyclic models recapitulated this network in solution. Condensation of an acetal and a triazinyl hydrazine, which adopted a number of conformational isomers, yielded a hydrazone that adopted a favored rotamer conformation in solution. The critical hydrogen-bonded proton was also evident. DFT calculations of acyclic models showed that the rotamers were isoenergetic when deprotonated. Upon protonation, however, energies diverged with one low-energy rotamer adopting the conformation observed in the macrocycle. This conformation anchored the network of hydrogen bonds of the intermediate. Computation revealed that the hydrogen-bonded network in the acyclic intermediate contributed up to 14 kcal/mol of stability and preorganized the acetal and hydrazine for cyclization.

摘要

在缺乏预组织的情况下,大环化反应通常会受到低聚物和聚合物副产物的困扰。在这里,氢键网络被确定为单体二聚化生成大环的定量产率的基础。没有观察到低聚物和聚合物。推测大环化反应是通过两个腙的形成来进行的,该反应分两步进行。在缩合生成单腙后,氢键网络形成以预组织末端缩醛和肼基团进行环化。来自大环和无环模型的预组织实验证据。溶液 NMR 光谱和单晶 X 射线衍射表明,从环化反应中分离出的大环被质子化了两次。这些质子有助于形成分子内氢键网络,使相隔较远的羰基相互作用,实现远程有序。DFT 计算表明,这种氢键网络对稳定性的贡献为 8.7 kcal/mol。无环模型在溶液中再现了这种氢键网络。缩醛和三嗪基腙的缩合,采用了许多构象异构体,生成了一种腙,该腙在溶液中采用了有利的旋转异构体构象。关键的氢键质子也很明显。无环模型的 DFT 计算表明,当脱质子化时,旋转异构体是等能的。然而,一旦质子化,能量就会发散,其中一个低能旋转异构体采用在大环中观察到的构象。这种构象固定了中间体的氢键网络。计算表明,无环中间体中氢键网络的贡献高达 14 kcal/mol 的稳定性,并预组织了缩醛和肼以进行环化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b66/9921993/a53ae2ec70b9/molecules-28-01144-sch001.jpg

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