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花生四烯酸脂氧合酶5是一种新型的预后生物标志物,与低级别胶质瘤中高肿瘤免疫浸润相关。

Arachidonate lipoxygenases 5 is a novel prognostic biomarker and correlates with high tumor immune infiltration in low-grade glioma.

作者信息

Pan Rui-Han, Zhang Xin, Chen Zu-Peng, Liu Ya-Jun

机构信息

Department of Neurosurgery, The First Affiliated Hospital of Zhejiang Chinese Medical University, Hangzhou, Zhejiang, China.

出版信息

Front Genet. 2023 Jan 27;14:1027690. doi: 10.3389/fgene.2023.1027690. eCollection 2023.


DOI:10.3389/fgene.2023.1027690
PMID:36777735
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9911666/
Abstract

To investigate the prognostic value of arachidonate lipoxygenases 5 (ALOX5) expression and methylation, and explore the immune functions of arachidonate lipoxygenases 5 expression in low-grade glioma (LGG). Using efficient bioinformatics approaches, the differential expression of arachidonate lipoxygenases 5 and the association of its expression with clinicopathological characteristics were evaluated. Then, we analyzed the prognostic significance of arachidonate lipoxygenases 5 expression and its methylation level followed by immune cell infiltration analysis. The functional enrichment analysis was conducted to determine the possible regulatory pathways of arachidonate lipoxygenases 5 in low-grade glioma. Finally, the drug sensitivity analysis was performed to explore the correlation between arachidonate lipoxygenases 5 expression and chemotherapeutic drugs. arachidonate lipoxygenases 5 mRNA expression was increased in low-grade glioma and its expression had a notable relation with age and subtype ( < 0.05). The elevated mRNA level of arachidonate lipoxygenases 5 could independently predict the disease-specific survival (DSS), overall survival (OS), and progression-free interval (PFI) ( < 0.05). Besides, arachidonate lipoxygenases 5 expression was negatively correlated with its methylation level and the arachidonate lipoxygenases 5 hypomethylation led to a worse prognosis ( < 0.05). The arachidonate lipoxygenases 5 expression also showed a positive connection with immune cells, while low-grade glioma patients with higher immune cell infiltration had poor survival probability ( < 0.05). Further, arachidonate lipoxygenases 5 might be involved in immune- and inflammation-related pathways. Importantly, arachidonate lipoxygenases 5 expression was negatively related to drug sensitivity. arachidonate lipoxygenases 5 might be a promising biomarker, and it probably occupies a vital role in immune cell infiltration in low-grade glioma.

摘要

为研究花生四烯酸脂氧合酶5(ALOX5)表达和甲基化的预后价值,并探讨花生四烯酸脂氧合酶5表达在低级别胶质瘤(LGG)中的免疫功能。采用高效的生物信息学方法,评估花生四烯酸脂氧合酶5的差异表达及其表达与临床病理特征的相关性。然后,分析花生四烯酸脂氧合酶5表达及其甲基化水平的预后意义,随后进行免疫细胞浸润分析。进行功能富集分析以确定花生四烯酸脂氧合酶5在低级别胶质瘤中可能的调控途径。最后,进行药物敏感性分析以探讨花生四烯酸脂氧合酶5表达与化疗药物之间的相关性。花生四烯酸脂氧合酶5 mRNA表达在低级别胶质瘤中升高,其表达与年龄和亚型有显著关系(<0.05)。花生四烯酸脂氧合酶5升高的mRNA水平可独立预测疾病特异性生存(DSS)、总生存(OS)和无进展生存期(PFI)(<0.05)。此外,花生四烯酸脂氧合酶5表达与其甲基化水平呈负相关,花生四烯酸脂氧合酶5低甲基化导致预后较差(<0.05)。花生四烯酸脂氧合酶5表达也与免疫细胞呈正相关,而免疫细胞浸润较高的低级别胶质瘤患者生存概率较差(<0.05)。此外,花生四烯酸脂氧合酶5可能参与免疫和炎症相关途径。重要的是,花生四烯酸脂氧合酶5表达与药物敏感性呈负相关。花生四烯酸脂氧合酶5可能是一个有前景的生物标志物,并且它可能在低级别胶质瘤的免疫细胞浸润中起重要作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/4ead2e8abdd4/fgene-14-1027690-g013.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/ebd5928c30c5/fgene-14-1027690-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/5ea39398b723/fgene-14-1027690-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/798a243070d1/fgene-14-1027690-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/4f90e574a11b/fgene-14-1027690-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/271cbc094bfb/fgene-14-1027690-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/910356e24b30/fgene-14-1027690-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/b120623d6440/fgene-14-1027690-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/4ead2e8abdd4/fgene-14-1027690-g013.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/0ea5780078bc/fgene-14-1027690-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/c3f1577c4397/fgene-14-1027690-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/450d1586591a/fgene-14-1027690-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/1723643c0109/fgene-14-1027690-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/eb4579b67501/fgene-14-1027690-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/ebd5928c30c5/fgene-14-1027690-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/5ea39398b723/fgene-14-1027690-g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/798a243070d1/fgene-14-1027690-g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/4f90e574a11b/fgene-14-1027690-g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/271cbc094bfb/fgene-14-1027690-g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/910356e24b30/fgene-14-1027690-g011.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/b120623d6440/fgene-14-1027690-g012.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4701/9911666/4ead2e8abdd4/fgene-14-1027690-g013.jpg

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本文引用的文献

[1]
CCR5 as a Prognostic Factor in Lower-Grade Glioma is Involved in the Remodeling of the Tumor Microenvironment.

Front Genet. 2022-7-5

[2]
A Risk Model Developed Based on Homologous Recombination Deficiency Predicts Overall Survival in Patients With Lower Grade Glioma.

Front Genet. 2022-7-1

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Identification and Validation in a Novel Quantification System of Ferroptosis Patterns for the Prediction of Prognosis and Immunotherapy Response in Left- and Right-Sided Colon Cancer.

Front Immunol. 2022

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RFC2: a prognosis biomarker correlated with the immune signature in diffuse lower-grade gliomas.

Sci Rep. 2022-2-24

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Front Genet. 2022-1-7

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The Novel Methylation Biomarker SCARA5 Sensitizes Cancer Cells to DNA Damage Chemotherapy Drugs in NSCLC.

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ALOX5-5-HETE promotes gastric cancer growth and alleviates chemotherapy toxicity via MEK/ERK activation.

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