Center of Physiology, Pathophysiology and Biophysics, Paracelsus Medical University, Nuremberg, Germany.
Institute of Biological Information Processing (IBI-1), Molekular- und Zellphysiologie, Forschungszentrum Jülich, Jülich, Germany.
FEBS J. 2023 Jul;290(13):3436-3447. doi: 10.1111/febs.16751. Epub 2023 Mar 3.
Recently, three proton channels (H ) have been identified and characterized in Aplysia californica (AcH 1-3). Focusing on AcH 1 and AcH 2, analysis of Transcriptome Shotgun Assembly and genomic databases of 91 molluscs identified H homologous channels in other molluscs: channels homologous to AcH 1 and to AcH 2 were found in 90 species (56 full-length sequences) and in 33 species (18 full-length sequences), respectively. Here, we report the discovery of a fourth distinct proton channel family, H 4. This new family has high homology to AcH 1 and AcH 2 and was identified only in bivalvian molluscs (13 species, 12 full-length sequences). Typically, these channels possess an extracellular S1-S2 loop of intermediate size (~ 20 amino acids) compared to the shorter loops of molluscan H 1 channels (~ 13 amino acids) and the much larger loops of molluscan H 2 channels (> 65 amino acids). The characteristic voltage-sensor motif in S4 possesses only two arginine residues with the common third arginine being replaced by a lysine. Moreover, H 4 channels are much smaller with only around 200 amino acids in total length. The smallest functional channel found so far in nature (189 amino acids) is expressed in the pacific oyster Crassostrea gigas (CgH 4) and might be considered an archetypical minimal proton channel. Functional expression and electrophysiological characterization demonstrated that CgH 4 shares distinctive hallmarks of other investigated proton channels as high proton selectivity, slow activation, and pH- and voltage-regulated gating. This work is the first description of a H 4 type channel, adding a new member to the recently expanded family of proton channels.
最近,在加利福尼亚海兔(Aplysia californica)中鉴定并表征了三种质子通道(H )。针对 AcH 1 和 AcH 2,对 91 种软体动物的转录组鸟枪法测序和基因组数据库进行分析,在其他软体动物中发现了与 H 同源的通道:与 AcH 1 和 AcH 2 同源的通道分别在 90 种(56 个全长序列)和 33 种(18 个全长序列)中被发现。在这里,我们报告了第四种独特的质子通道家族 H 4 的发现。这个新家族与 AcH 1 和 AcH 2 具有高度同源性,仅在双壳类软体动物中被鉴定(13 种,12 个全长序列)。通常,这些通道的细胞外 S1-S2 环的大小处于中间水平(20 个氨基酸),与软体动物 H 1 通道的较短环(13 个氨基酸)和软体动物 H 2 通道的较大环(>65 个氨基酸)相比。S4 中的特征电压传感器基序仅具有两个精氨酸残基,常见的第三个精氨酸被赖氨酸取代。此外,H 4 通道的大小要小得多,全长只有约 200 个氨基酸。迄今为止在自然界中发现的最小功能性通道(189 个氨基酸)在太平洋牡蛎(Crassostrea gigas)中表达,可被视为典型的最小质子通道。功能表达和电生理特性表明,CgH 4 具有其他研究质子通道的独特特征,如高质子选择性、缓慢激活以及 pH 和电压调节门控。这项工作首次描述了 H 4 型通道,为最近扩展的质子通道家族增加了一个新成员。