Departamento de Genética y Biología Molecular, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (CINVESTAV-IPN), Mexico City, Mexico.
Arch Virol. 2023 Feb 16;168(3):92. doi: 10.1007/s00705-023-05721-w.
The coliphage mEp021 belongs to a phage group with a unique immunity repressor, and its life cycle requires the host factor Nus. mEp021 has been classified as non-lambdoid based on its specific characteristics. The mEp021 genome carries a gene encoding an N-like antiterminator protein, termed Gp17, and three nut sites (nutL, nutR1, and nutR2). Analysis of plasmid constructs containing these nut sites, a transcription terminator, and a GFP reporter gene showed high levels of fluorescence when Gp17 was expressed, but not in its absence. Like lambdoid N proteins, Gp17 has an arginine-rich motif (ARM), and mutations in its arginine codons inhibit its function. In infection assays using the mutant phage mEp021ΔGp17::Kan (where gp17 has been deleted), gene transcripts located downstream of transcription terminators were obtained only when Gp17 was expressed. In contrast to phage lambda, mEp021 virus particle production was partially restored (>1/3 relative to wild type) when nus mutants (nusA1, nusB5, nusC60, and nusE71) were infected with mEp021 and Gp17 was overexpressed. Our results suggest that RNA polymerase reads through the third nut site (nutR2), which is more than 7.9 kbp downstream of nutR1.
大肠杆菌噬菌体 mEp021 属于具有独特免疫抑制因子的噬菌体群,其生命周期需要宿主因子 Nus。根据其特定特征,mEp021 被归类为非 λ 噬菌体。mEp021 基因组携带一个编码 N 样反终止蛋白的基因,称为 Gp17,以及三个 nut 位点(nutL、nutR1 和 nutR2)。含有这些 nut 位点、转录终止子和 GFP 报告基因的质粒构建体的分析表明,当表达 Gp17 时,荧光水平很高,但在没有 Gp17 时则没有。与 λ 噬菌体 N 蛋白一样,Gp17 具有富含精氨酸的基序(ARM),其精氨酸密码子的突变会抑制其功能。在使用突变噬菌体 mEp021ΔGp17::Kan(其中 gp17 已被删除)进行的感染实验中,只有在表达 Gp17 时,才能获得位于转录终止子下游的基因转录物。与噬菌体 λ 不同,当 nus 突变体(nusA1、nusB5、nusC60 和 nusE71)感染 mEp021 并过表达 Gp17 时,mEp021 病毒粒子的产生部分得到恢复(相对于野生型超过 1/3)。我们的结果表明,RNA 聚合酶通读第三个 nut 位点(nutR2),该位点位于 nutR1 下游超过 7.9 kbp 处。