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关于土臭素生物合成的详细观察。

A Detailed View on Geosmin Biosynthesis.

机构信息

Kekulé Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Straße 1, 53121, Bonn, Germany.

出版信息

Chembiochem. 2023 Jun 15;24(12):e202300101. doi: 10.1002/cbic.202300101. Epub 2023 May 16.

Abstract

The bacterial geosmin synthase is a fascinating bifunctional enzyme that has been discovered almost two decades ago. Several aspects of the cyclisation mechanism from FPP to geosmin are known, but a detailed picture of the stereochemical course of this reaction is unknown. This article reports on a deep investigation of the mechanism of geosmin synthase through isotopic labelling experiments. Furthermore, the effects of divalent cations on geosmin synthase catalysis were investigated. The addition of cyclodextrin to enzymatic reactions, a molecule that can capture terpenes, suggests that the biosynthetic intermediate (1(10)E,5E)-germacradien-11-ol produced by the N-terminal domain is passed to the C-terminal domain not through a tunnel, but rather through release into the medium and uptake by the C-terminal domain.

摘要

细菌地霉灵合酶是一种令人着迷的双功能酶,它在大约二十年前被发现。目前已经了解了 FPP 环化为地霉灵的几个环化机制方面,但该反应的立体化学过程的详细情况尚不清楚。本文通过同位素标记实验对地霉灵合酶的机制进行了深入研究。此外,还研究了二价阳离子对地霉灵合酶催化的影响。向酶反应中添加可以捕获萜类化合物的环糊精表明,由 N 端结构域产生的生物合成中间体(1(10)E,5E)- 金合欢-11-醇不是通过隧道传递到 C 端结构域,而是通过释放到介质中并被 C 端结构域吸收。

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