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自动埃德曼降解和氨基酸分析数据的计算机分析

Computer analysis of automated Edman degradation and amino acid analysis data.

作者信息

Henzel W J, Rodriguez H, Watanabe C

机构信息

Department of Developmental Biology, Genentech, Inc., South San Francisco, CA 94080.

出版信息

J Chromatogr. 1987 Aug 28;404(1):41-52. doi: 10.1016/s0021-9673(01)86835-7.

DOI:10.1016/s0021-9673(01)86835-7
PMID:3680444
Abstract

Computer programs are described that allow facile analysis of data from a protein sequencer and amino acid analyzer. The sequencer program provides automated sequence interpretation while requiring minimal user interaction. The program serves as a powerful aid in deciphering mixture sequences and allows routine monitoring of sequencer performance. The computer program for amino acid analysis data provides the following calculations: mole percent, protein concentration and residues per mole with comparison between theoretical and calculated values. A plot of molecular weight versus deviation from integer values is calculated providing a measure of peptide or protein purity.

摘要

本文描述了一些计算机程序,这些程序可方便地分析来自蛋白质测序仪和氨基酸分析仪的数据。测序仪程序可实现自动化序列解读,同时只需用户进行极少的交互操作。该程序在解读混合序列方面是一个强大的辅助工具,还能对测序仪的性能进行常规监测。用于氨基酸分析数据的计算机程序可进行以下计算:摩尔百分比、蛋白质浓度以及每摩尔的残基数,并能对理论值和计算值进行比较。通过计算分子量与偏离整数值的偏差绘制的图表,可衡量肽或蛋白质的纯度。

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1
Computer analysis of automated Edman degradation and amino acid analysis data.自动埃德曼降解和氨基酸分析数据的计算机分析
J Chromatogr. 1987 Aug 28;404(1):41-52. doi: 10.1016/s0021-9673(01)86835-7.
2
Solid-phase sequencing on the gas-phase sequencer.气相测序仪上的固相测序
Anal Biochem. 1986 May 1;154(2):542-51. doi: 10.1016/0003-2697(86)90027-8.
3
Use of o-phthalaldehyde to reduce background during automated Edman degradation.使用邻苯二甲醛在自动埃德曼降解过程中降低背景。
Anal Biochem. 1984 Feb;137(1):134-42. doi: 10.1016/0003-2697(84)90359-2.
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Sequence analysis of peptide mixtures by automated integration of Edman and mass spectrometric data.通过自动整合埃德曼降解和质谱数据对肽混合物进行序列分析。
Protein Sci. 1992 Sep;1(9):1083-91. doi: 10.1002/pro.5560010902.
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[Application of the automatic Edman procedure to establishing the primary structure of swine pepsinogen and its fragments].[自动埃德曼程序在确定猪胃蛋白酶原及其片段一级结构中的应用]
Biokhimiia. 1975 Jul-Aug;40(4):762-8.
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A simple modification on the vacuum system of the Beckman automated sequencer to improve the efficiency of Edman degradation.
Anal Biochem. 1980 Feb;102(1):35-8. doi: 10.1016/0003-2697(80)90313-9.
7
A role for Edman degradation in proteome studies.埃德曼降解法在蛋白质组学研究中的作用。
Electrophoresis. 1997 Jun;18(7):1068-72. doi: 10.1002/elps.1150180707.
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Sequencing of peptide mixtures by Edman degradation and field-desorption mass spectrometry.通过埃德曼降解法和场解吸质谱法对肽混合物进行测序。
Eur J Biochem. 1980 Nov;112(2):251-64. doi: 10.1111/j.1432-1033.1980.tb07201.x.
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Sensitization of Edman amino acid derivatives using the fluorescent reagent, 4-aminofluorescein.
J Biochem. 1989 Jul;106(1):60-5. doi: 10.1093/oxfordjournals.jbchem.a122820.
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The amino acid sequence of plastocyanin from Solanum tuberosum L. (potato).来自茄属植物马铃薯的质体蓝素的氨基酸序列。
Biochem J. 1974 Jun;139(3):583-92. doi: 10.1042/bj1390583.

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