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在计算机上探索不同的磷酸二酯酶 4 抑制剂化学型,以指导抗炎/抗氧化剂的设计。

Scouting Different Phosphodiesterase 4 Inhibitor Chemotypes in Silico To Guide the Design of Anti-inflammatory/Antioxidant Agents.

机构信息

Department of Pharmacy (DIFAR), Section of Medicinal Chemistry, University of Genova, Viale Benedetto XV 3, 16132, Genova, Italy.

Department of Pharmacy (DIFAR), Section of Organic Chemistry, University of Genova, Viale Cembrano 4, 16148, Genova, Italy.

出版信息

ChemMedChem. 2023 May 2;18(9):e202300046. doi: 10.1002/cmdc.202300046. Epub 2023 Mar 10.

Abstract

During the last years, we developed a large library of new selective phosphodiesterase 4D inhibitors, maintaining the catechol portion of the well-known PDE4 inhibitor Rolipram, featuring different substitutions in place of the lactam group of this reference compound. Based on the X-ray analysis of PDE4 inhibitors (PDE4Is) previously synthesized by us and of naphthyridine- and naphthyridinone-containing derivatives exhibiting PDE4 inhibitory ability described in the literature, we designed and synthesized new compounds 1-3. All of them were screened in silico as putative PDE4Is, via molecular docking studies to exploit structural variation at the catechol group to gain further contacts especially with the flat aromatic residues (Phe506 and Phe538) of enzyme. Subsequent in silico prediction of ADMET properties and in vitro biological assays on platelets and endothelial cells are in good agreement with our previous data concerning the antioxidant/anti-inflammatory activity exhibited by our previous PDE4Is and similarly to other well-known PDE4Is.

摘要

在过去的几年中,我们开发了大量新的选择性磷酸二酯酶 4D 抑制剂库,保留了著名的磷酸二酯酶 4 抑制剂 Rolipram 的儿茶酚部分,其特点是在该参考化合物的内酰胺基团上进行了不同的取代。基于我们之前合成的磷酸二酯酶 4 抑制剂 (PDE4Is) 的 X 射线分析,以及文献中描述的具有 PDE4 抑制能力的萘啶和萘啶酮衍生物,我们设计并合成了新化合物 1-3。所有化合物都通过分子对接研究进行了计算机筛选,作为潜在的 PDE4Is,以利用儿茶酚部分的结构变化获得与酶的平面芳香残基(Phe506 和 Phe538)的进一步接触。随后对 ADMET 性质进行计算机预测,并在血小板和内皮细胞上进行体外生物测定,这与我们之前关于我们之前的 PDE4Is 表现出的抗氧化/抗炎活性的相关数据以及与其他著名的 PDE4Is 的结果非常一致。

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