Repetto Linda, Chen Jiantao, Yang Zhijian, Zhai Ranran, Timmers Paul R H J, Li Ting, Twait Emma L, May-Wilson Sebastian, Muckian Marisa D, Prins Bram P, Png Grace, Kooperberg Charles, Johansson Åsa, Hillary Robert F, Wheeler Eleanor, Pan Lu, He Yazhou, Klasson Sofia, Ahmad Shahzad, Peters James E, Gilly Arthur, Karaleftheri Maria, Tsafantakis Emmanouil, Haessler Jeffrey, Gyllensten Ulf, Harris Sarah E, Wareham Nicholas J, Göteson Andreas, Lagging Cecilia, Ikram Mohammad Arfan, van Duijn Cornelia M, Jern Christina, Landén Mikael, Langenberg Claudia, Deary Ian J, Marioni Riccardo E, Enroth Stefan, Reiner Alexander P, Dedoussis George, Zeggini Eleftheria, Butterworth Adam S, Mälarstig Anders, Wilson James F, Navarro Pau, Shen Xia
Centre for Global Health Research, Usher Institute, University of Edinburgh, Edinburgh, UK.
State Key Laboratory of Genetic Engineering, School of Life Sciences, Fudan University, Shanghai, China.
medRxiv. 2023 Feb 14:2023.02.10.23285650. doi: 10.1101/2023.02.10.23285650.
Understanding the genetic basis of neuro-related proteins is essential for dissecting the disease etiology of neuropsychiatric disorders and other complex traits and diseases. Here, the SCALLOP Consortium conducted a genome-wide association meta-analysis of over 12,500 individuals for 184 neuro-reiated proteins in human plasma. The analysis identified 117 cis-regulatory protein quantitative trait loci (cis-pQTL) and 166 trans-pQTL. The mapped pQTL capture on average 50% of each protein's heritability. Mendelian randomization analyses revealed multiple proteins showing potential causal effects on neuro-reiated traits as well as complex diseases such as hypertension, high cholesterol, immune-related disorders, and psychiatric disorders. Integrating with established drug information, we validated 13 combinations of protein targets and diseases or side effects with available drugs, while suggesting hundreds of re-purposing and new therapeutic targets for diseases and comorbidities. This consortium effort provides a large-scale proteogenomic resource for biomedical research.
了解神经相关蛋白的遗传基础对于剖析神经精神疾病以及其他复杂性状和疾病的病因至关重要。在此,SCALLOP联盟对超过12,500名个体的184种人血浆中神经相关蛋白进行了全基因组关联荟萃分析。该分析确定了117个顺式调节蛋白定量性状位点(顺式pQTL)和166个反式pQTL。定位的pQTL平均捕获了每种蛋白质遗传力的50%。孟德尔随机化分析揭示了多种蛋白质对神经相关性状以及高血压、高胆固醇、免疫相关疾病和精神疾病等复杂疾病具有潜在因果效应。结合已有的药物信息,我们用现有药物验证了13种蛋白质靶点与疾病或副作用的组合,同时为疾病和合并症提出了数百个重新利用和新的治疗靶点。这项联盟工作为生物医学研究提供了大规模的蛋白质基因组资源。